KEGG   PATHWAY: brp00710
Entry
brp00710                    Pathway                                
Name
Carbon fixation by Calvin cycle - Brassica rapa (field mustard)
Class
Metabolism; Energy metabolism
Pathway map
brp00710  Carbon fixation by Calvin cycle
brp00710

Module
brp_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:brp00710]
brp_M00168  CAM (Crassulacean acid metabolism), dark [PATH:brp00710]
brp_M00169  CAM (Crassulacean acid metabolism), light [PATH:brp00710]
brp_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:brp00710]
brp_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:brp00710]
brp_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:brp00710]
Organism
Brassica rapa (field mustard) [GN:brp]
Gene
41704059  rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
117125990  ribulose bisphosphate carboxylase large chain [KO:K01601] [EC:4.1.1.39]
117129780  ribulose bisphosphate carboxylase large chain [KO:K01601] [EC:4.1.1.39]
103852369  ribulose bisphosphate carboxylase small chain 1A, chloroplastic [KO:K01602] [EC:4.1.1.39]
103852368  ribulose bisphosphate carboxylase small chain 1B, chloroplastic [KO:K01602] [EC:4.1.1.39]
103852372  ribulose bisphosphate carboxylase small chain 1B, chloroplastic [KO:K01602] [EC:4.1.1.39]
103864160  ribulose bisphosphate carboxylase small chain F1, chloroplastic [KO:K01602] [EC:4.1.1.39]
103850112  ribulose bisphosphate carboxylase small chain F1, chloroplastic [KO:K01602] [EC:4.1.1.39]
103863779  ribulose bisphosphate carboxylase small chain F1, chloroplastic isoform X2 [KO:K01602] [EC:4.1.1.39]
117133689  ribulose bisphosphate carboxylase small chain, chloroplastic isoform X1 [KO:K01602] [EC:4.1.1.39]
103863782  ribulose bisphosphate carboxylase small chain, chloroplastic-like isoform X1 [KO:K01602] [EC:4.1.1.39]
103849710  phosphoglycerate kinase 1, chloroplastic [KO:K00927] [EC:2.7.2.3]
103830478  phosphoglycerate kinase 3, cytosolic [KO:K00927] [EC:2.7.2.3]
103832426  phosphoglycerate kinase 3, cytosolic [KO:K00927] [EC:2.7.2.3]
103859466  phosphoglycerate kinase 1, chloroplastic [KO:K00927] [EC:2.7.2.3]
103853201  phosphoglycerate kinase 3, cytosolic [KO:K00927] [EC:2.7.2.3]
103870225  phosphoglycerate kinase 1, chloroplastic [KO:K00927] [EC:2.7.2.3]
103848938  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
103850055  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
103853196  glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic [KO:K00134] [EC:1.2.1.12]
103830479  glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic [KO:K00134] [EC:1.2.1.12]
103836104  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
103843050  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
103872420  glyceraldehyde-3-phosphate dehydrogenase GAPCP2, chloroplastic [KO:K00134] [EC:1.2.1.12]
103872054  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
103843097  glyceraldehyde-3-phosphate dehydrogenase GAPA2, chloroplastic isoform X1 [KO:K05298] [EC:1.2.1.13]
103875281  glyceraldehyde-3-phosphate dehydrogenase GAPA1, chloroplastic [KO:K05298] [EC:1.2.1.13]
103833307  glyceraldehyde-3-phosphate dehydrogenase GAPB, chloroplastic [KO:K05298] [EC:1.2.1.13]
103871970  glyceraldehyde-3-phosphate dehydrogenase GAPA2, chloroplastic isoform X1 [KO:K05298] [EC:1.2.1.13]
103866271  fructose-bisphosphate aldolase 2, chloroplastic [KO:K01623] [EC:4.1.2.13]
103866289  fructose-bisphosphate aldolase 5, cytosolic [KO:K01623] [EC:4.1.2.13]
103847368  fructose-bisphosphate aldolase 4, cytosolic [KO:K01623] [EC:4.1.2.13]
103828073  fructose-bisphosphate aldolase 2, chloroplastic [KO:K01623] [EC:4.1.2.13]
103832773  fructose-bisphosphate aldolase 3, chloroplastic [KO:K01623] [EC:4.1.2.13]
103835152  fructose-bisphosphate aldolase 2, chloroplastic [KO:K01623] [EC:4.1.2.13]
103841225  fructose-bisphosphate aldolase 8, cytosolic [KO:K01623] [EC:4.1.2.13]
103842537  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
103864267  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
103850273  fructose-bisphosphate aldolase 8, cytosolic [KO:K01623] [EC:4.1.2.13]
103865548  fructose-bisphosphate aldolase 6, cytosolic [KO:K01623] [EC:4.1.2.13]
103872153  fructose-bisphosphate aldolase 8, cytosolic-like [KO:K01623] [EC:4.1.2.13]
103873862  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
103841316  fructose-1,6-bisphosphatase 1, chloroplastic [KO:K03841] [EC:3.1.3.11]
103833143  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
103867569  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
103863263  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
103841917  transketolase-1, chloroplastic isoform X1 [KO:K00615] [EC:2.2.1.1]
103862864  transketolase-1, chloroplastic [KO:K00615] [EC:2.2.1.1]
103866871  transketolase-2, chloroplastic [KO:K00615] [EC:2.2.1.1]
103841487  sedoheptulose-1,7-bisphosphatase, chloroplastic [KO:K01100] [EC:3.1.3.37]
103830026  sedoheptulose-1,7-bisphosphatase, chloroplastic isoform X1 [KO:K01100] [EC:3.1.3.37]
103863135  sedoheptulose-1,7-bisphosphatase, chloroplastic isoform X1 [KO:K01100] [EC:3.1.3.37]
103849145  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
103850028  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
103832793  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
103827896  probable ribose-5-phosphate isomerase 4, chloroplastic isoform X1 [KO:K01807] [EC:5.3.1.6]
103852702  probable ribose-5-phosphate isomerase 1 [KO:K01807] [EC:5.3.1.6]
103827594  probable ribose-5-phosphate isomerase 2 isoform X2 [KO:K01807] [EC:5.3.1.6]
103868914  phosphoribulokinase, chloroplastic [KO:K00855] [EC:2.7.1.19]
103840194  phosphoribulokinase, chloroplastic [KO:K00855] [EC:2.7.1.19]
103833678  phosphoribulokinase, chloroplastic [KO:K00855] [EC:2.7.1.19]
103842552  triosephosphate isomerase, chloroplastic [KO:K01803] [EC:5.3.1.1]
103863163  triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
103863161  triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
103864252  triosephosphate isomerase, chloroplastic [KO:K01803] [EC:5.3.1.1]
103842310  LOW QUALITY PROTEIN: triosephosphate isomerase, cytosolic [KO:K01803] [EC:5.3.1.1]
103847037  ribulose-5-phosphate-3-epimerase, chloroplastic isoform X1 [KO:K01783] [EC:5.1.3.1]
103838288  ribulose-phosphate 3-epimerase, cytoplasmic isoform isoform X1 [KO:K01783] [EC:5.1.3.1]
103860590  ribulose-5-phosphate-3-epimerase, chloroplastic [KO:K01783] [EC:5.1.3.1]
103846575  transaldolase [KO:K00616] [EC:2.2.1.2]
103872022  transaldolase [KO:K00616] [EC:2.2.1.2]
103850867  transaldolase [KO:K00616] [EC:2.2.1.2]
103856014  transaldolase [KO:K00616] [EC:2.2.1.2]
103866650  phosphoenolpyruvate carboxylase 2 isoform X1 [KO:K01595] [EC:4.1.1.31]
103830950  phosphoenolpyruvate carboxylase 4 isoform X1 [KO:K01595] [EC:4.1.1.31]
103840598  phosphoenolpyruvate carboxylase 4 [KO:K01595] [EC:4.1.1.31]
103832677  phosphoenolpyruvate carboxylase 1 [KO:K01595] [EC:4.1.1.31]
103865958  phosphoenolpyruvate carboxylase 2 [KO:K01595] [EC:4.1.1.31]
103859599  phosphoenolpyruvate carboxylase 3 [KO:K01595] [EC:4.1.1.31]
103869972  phosphoenolpyruvate carboxylase 3 [KO:K01595] [EC:4.1.1.31]
103848200  aspartate aminotransferase, cytoplasmic isozyme 2 [KO:K14454] [EC:2.6.1.1]
103851283  aspartate aminotransferase, cytoplasmic isozyme 1 [KO:K14454] [EC:2.6.1.1]
103845742  aspartate aminotransferase, cytoplasmic isozyme 1 [KO:K14454] [EC:2.6.1.1]
103838043  aspartate aminotransferase, cytoplasmic isozyme 2 isoform X1 [KO:K14454] [EC:2.6.1.1]
103838363  aspartate aminotransferase, cytoplasmic isozyme 2 [KO:K14454] [EC:2.6.1.1]
103855915  aspartate aminotransferase 3, chloroplastic [KO:K14454] [EC:2.6.1.1]
103856993  phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
103874006  phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
103855313  phosphoenolpyruvate carboxykinase (ATP)-like isoform X2 [KO:K01610] [EC:4.1.1.49]
103862585  phosphoenolpyruvate carboxykinase (ATP)-like [KO:K01610] [EC:4.1.1.49]
103842798  alanine aminotransferase 1, mitochondrial [KO:K00814] [EC:2.6.1.2]
103872517  alanine aminotransferase 1, mitochondrial [KO:K00814] [EC:2.6.1.2]
103835961  alanine aminotransferase 1, mitochondrial [KO:K00814] [EC:2.6.1.2]
103829276  glutamate--glyoxylate aminotransferase 1 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
103835672  glutamate--glyoxylate aminotransferase 1 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
103831592  glutamate--glyoxylate aminotransferase 2 isoform X2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
103840779  glutamate--glyoxylate aminotransferase 1 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
103870831  pyruvate, phosphate dikinase 1, chloroplastic [KO:K01006] [EC:2.7.9.1]
103860785  pyruvate, phosphate dikinase 1, chloroplastic [KO:K01006] [EC:2.7.9.1]
103828269  NADP-dependent malic enzyme 1 [KO:K00029] [EC:1.1.1.40]
103830635  NADP-dependent malic enzyme 4, chloroplastic [KO:K00029] [EC:1.1.1.40]
103874433  NADP-dependent malic enzyme 3 [KO:K00029] [EC:1.1.1.40]
103850789  NADP-dependent malic enzyme 2 [KO:K00029] [EC:1.1.1.40]
103855920  NADP-dependent malic enzyme 2 [KO:K00029] [EC:1.1.1.40]
103845258  malate dehydrogenase [NADP], chloroplastic [KO:K00051] [EC:1.1.1.82]
103851645  malate dehydrogenase [NADP], chloroplastic [KO:K00051] [EC:1.1.1.82]
103856701  malate dehydrogenase [NADP], chloroplastic [KO:K00051] [EC:1.1.1.82]
103865090  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
103844258  malate dehydrogenase 1, cytoplasmic [KO:K00025] [EC:1.1.1.37]
103836575  malate dehydrogenase 2, cytoplasmic [KO:K00025] [EC:1.1.1.37]
103839246  malate dehydrogenase 1, cytoplasmic [KO:K00025] [EC:1.1.1.37]
103845103  malate dehydrogenase 3, cytoplasmic [KO:K00025] [EC:1.1.1.37]
103847223  malate dehydrogenase 2, glyoxysomal [KO:K00026] [EC:1.1.1.37]
103872206  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
103873232  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
103871139  malate dehydrogenase 1, mitochondrial [KO:K00026] [EC:1.1.1.37]
103832683  malate dehydrogenase 1, mitochondrial [KO:K00026] [EC:1.1.1.37]
103850366  malate dehydrogenase 2, glyoxysomal [KO:K00026] [EC:1.1.1.37]
103864390  malate dehydrogenase 1, peroxisomal [KO:K00026] [EC:1.1.1.37]
103868444  malate dehydrogenase 1, mitochondrial isoform X1 [KO:K00026] [EC:1.1.1.37]
103858863  NAD-dependent malic enzyme 2, mitochondrial [KO:K00028] [EC:1.1.1.39]
103837635  NAD-dependent malic enzyme 1, mitochondrial [KO:K00028] [EC:1.1.1.39]
103836911  NAD-dependent malic enzyme 2, mitochondrial [KO:K00028] [EC:1.1.1.39]
Compound
C00001  H2O
C00011  CO2
C00022  Pyruvate
C00036  Oxaloacetate
C00041  L-Alanine
C00049  L-Aspartate
C00074  Phosphoenolpyruvate
C00085  D-Fructose 6-phosphate
C00111  Glycerone phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00149  (S)-Malate
C00197  3-Phospho-D-glycerate
C00199  D-Ribulose 5-phosphate
C00231  D-Xylulose 5-phosphate
C00236  3-Phospho-D-glyceroyl phosphate
C00279  D-Erythrose 4-phosphate
C00354  D-Fructose 1,6-bisphosphate
C00447  Sedoheptulose 1,7-bisphosphate
C01182  D-Ribulose 1,5-bisphosphate
C05382  Sedoheptulose 7-phosphate
Related
pathway
brp00010  Glycolysis / Gluconeogenesis
brp00400  Phenylalanine, tyrosine and tryptophan biosynthesis
brp00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00710   
LinkDB

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