KEGG   PATHWAY: bsn00630
Entry
bsn00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Bacillus subtilis BSn5
Class
Metabolism; Carbohydrate metabolism
Pathway map
bsn00630  Glyoxylate and dicarboxylate metabolism
bsn00630

Module
bsn_M00621  Glycine cleavage system [PATH:bsn00630]
Other DBs
GO: 0046487 0043648
Organism
Bacillus subtilis BSn5 [GN:bsn]
Gene
BSn5_05625  putative acyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
BSn5_05695  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
BSn5_05390  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
BSn5_02605  citrate synthase 3 [KO:K01647] [EC:2.3.3.1]
BSn5_05400  citrate synthase [KO:K01647] [EC:2.3.3.1]
BSn5_16600  citrate synthase I [KO:K01647] [EC:2.3.3.1]
BSn5_00330  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
BSn5_02620  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BSn5_17060  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
BSn5_02495  putative lyase [KO:K05606] [EC:5.1.99.1]
BSn5_02490  putative acyl-CoA carboxylase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
BSn5_05170  glycolate oxidase subunit [KO:K00104] [EC:1.1.99.14]
BSn5_05175  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
BSn5_10335  catalase [KO:K03781] [EC:1.11.1.6]
BSn5_16285  catalase [KO:K03781] [EC:1.11.1.6]
BSn5_10550  catalase 2 [KO:K03781] [EC:1.11.1.6]
BSn5_08270  putative 2-hydroxyacid dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
BSn5_20860  glutamine synthetase, type I [KO:K01915] [EC:6.3.1.2]
BSn5_09400  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
BSn5_02830  glycine dehydrogenase subunit 1 [KO:K00282] [EC:1.4.4.2]
BSn5_02825  glycine dehydrogenase subunit 2 [KO:K00283] [EC:1.4.4.2]
BSn5_02835  gcvT; glycine cleavage system aminomethyltransferase T [KO:K00605] [EC:2.1.2.10]
BSn5_02565  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
BSn5_15950  acoL; dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
BSn5_19380  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
BSn5_07300  glycine cleavage system protein H [KO:K02437]
BSn5_11030  glycerate kinase [KO:K00865] [EC:2.7.1.165]
BSn5_13610  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
BSn5_01520  2-keto-3-deoxygluconate-6-phosphate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
BSn5_00710  oxalate decarboxylase [KO:K01569] [EC:4.1.1.2]
BSn5_07540  oxalate decarboxylase [KO:K01569] [EC:4.1.1.2]
BSn5_04395  putative oxido-reductase [KO:K00123] [EC:1.17.1.9]
BSn5_18040  putative oxidoreductase [KO:K00123] [EC:1.17.1.9]
BSn5_18580  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
bsn00010  Glycolysis / Gluconeogenesis
bsn00020  Citrate cycle (TCA cycle)
bsn00030  Pentose phosphate pathway
bsn00053  Ascorbate and aldarate metabolism
bsn00071  Fatty acid degradation
bsn00230  Purine metabolism
bsn00250  Alanine, aspartate and glutamate metabolism
bsn00260  Glycine, serine and threonine metabolism
bsn00620  Pyruvate metabolism
bsn00710  Carbon fixation by Calvin cycle
bsn00750  Vitamin B6 metabolism
bsn00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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