KEGG   PATHWAY: bstg00630
Entry
bstg00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Burkholderia stagnalis
Class
Metabolism; Carbohydrate metabolism
Pathway map
bstg00630  Glyoxylate and dicarboxylate metabolism
bstg00630

Module
bstg_M00012  Glyoxylate cycle [PATH:bstg00630]
bstg_M00621  Glycine cleavage system [PATH:bstg00630]
Other DBs
GO: 0046487 0043648
Organism
Burkholderia stagnalis [GN:bstg]
Gene
WT74_08775  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
WT74_10665  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
WT74_29950  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
WT74_06860  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
WT74_16810  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
WT74_11580  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
WT74_10685  malate synthase [KO:K01638] [EC:2.3.3.9]
WT74_32815  malate synthase G [KO:K01638] [EC:2.3.3.9]
WT74_23990  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
WT74_13520  citrate synthase [KO:K01647] [EC:2.3.3.1]
WT74_24025  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
WT74_27475  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
WT74_23970  acnA; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
WT74_30870  aconitate hydratase B [KO:K01682] [EC:4.2.1.3 4.2.1.99]
WT74_09950  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
WT74_14695  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
WT74_27315  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
WT74_15490  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
WT74_09355  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
WT74_09390  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
WT74_16800  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
WT74_17025  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
WT74_14690  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
WT74_09385  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
WT74_03575  glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
WT74_32795  glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
WT74_03570  glcE; glycolate oxidase [KO:K11472] [EC:1.1.99.14]
WT74_32800  glcE; glycolate oxidase [KO:K11472] [EC:1.1.99.14]
WT74_03565  glcF; glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
WT74_32805  glcF; glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
WT74_06400  catalase [KO:K03781] [EC:1.11.1.6]
WT74_00155  catalase [KO:K03781] [EC:1.11.1.6]
WT74_28075  catalase [KO:K03781] [EC:1.11.1.6]
WT74_24395  hypothetical protein [KO:K03781] [EC:1.11.1.6]
WT74_19125  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
WT74_15620  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
WT74_09090  D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
WT74_05550  D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
WT74_08750  glycerate dehydrogenase [KO:K00018] [EC:1.1.1.29]
WT74_29465  hydrolase [KO:K01091] [EC:3.1.3.18]
WT74_05595  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
WT74_02600  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
WT74_17100  hypothetical protein [KO:K01091] [EC:3.1.3.18]
WT74_11225  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
WT74_11345  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
WT74_15780  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
WT74_29650  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
WT74_30690  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
WT74_03920  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
WT74_30455  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
WT74_00850  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
WT74_00860  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
WT74_18540  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
WT74_11155  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
WT74_07630  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
WT74_00855  glycine cleavage system protein H [KO:K02437]
WT74_09820  glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
WT74_09825  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
WT74_10065  glycerate kinase [KO:K00865] [EC:2.7.1.165]
WT74_20435  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
WT74_22510  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
WT74_03250  2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
WT74_27905  cupin [KO:K01569] [EC:4.1.1.2]
WT74_05060  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
WT74_27245  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
WT74_24340  sulfate ABC transporter substrate-binding protein [KO:K00123] [EC:1.17.1.9]
WT74_24345  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
WT74_05065  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
WT74_27250  NADH dehydrogenase [KO:K00124]
WT74_05070  formate dehydrogenase [KO:K00124]
WT74_24350  formate dehydrogenase [KO:K00124]
WT74_05075  formate dehydrogenase [KO:K00127]
WT74_24355  formate dehydrogenase [KO:K00127]
WT74_30280  esterase [KO:K01432] [EC:3.5.1.9]
WT74_13735  kynurenine formamidase [KO:K07130] [EC:3.5.1.9]
WT74_20220  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
WT74_03865  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
WT74_14745  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
WT74_30335  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
WT74_11360  N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
bstg00010  Glycolysis / Gluconeogenesis
bstg00020  Citrate cycle (TCA cycle)
bstg00030  Pentose phosphate pathway
bstg00053  Ascorbate and aldarate metabolism
bstg00071  Fatty acid degradation
bstg00230  Purine metabolism
bstg00250  Alanine, aspartate and glutamate metabolism
bstg00260  Glycine, serine and threonine metabolism
bstg00620  Pyruvate metabolism
bstg00710  Carbon fixation by Calvin cycle
bstg00750  Vitamin B6 metabolism
bstg00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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