KEGG   PATHWAY: buu00630
Entry
buu00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Burkholderia mayonis
Class
Metabolism; Carbohydrate metabolism
Pathway map
buu00630  Glyoxylate and dicarboxylate metabolism
buu00630

Module
buu_M00012  Glyoxylate cycle [PATH:buu00630]
buu_M00621  Glycine cleavage system [PATH:buu00630]
Other DBs
GO: 0046487 0043648
Organism
Burkholderia mayonis [GN:buu]
Gene
WS70_06725  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
WS70_10825  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
WS70_19420  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
WS70_20490  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
WS70_19180  malate synthase G [KO:K01638] [EC:2.3.3.9]
WS70_06705  malate synthase [KO:K01638] [EC:2.3.3.9]
WS70_26035  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
WS70_26000  gltA; type II citrate synthase [KO:K01647] [EC:2.3.3.1]
WS70_04440  citrate synthase [KO:K01647] [EC:2.3.3.1]
WS70_26055  acnA; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
WS70_09090  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
WS70_09120  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
WS70_15585  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
WS70_00065  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
WS70_07470  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
WS70_09115  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
WS70_27045  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
WS70_03490  glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
WS70_03485  glcE; glycolate oxidase [KO:K11472] [EC:1.1.99.14]
WS70_03480  glcF; glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
WS70_00040  catalase [KO:K03781] [EC:1.11.1.6]
WS70_15775  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
WS70_17355  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
WS70_05385  D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
WS70_08880  D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
WS70_05430  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
WS70_02455  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
WS70_27795  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
WS70_06040  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
WS70_06135  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
WS70_19760  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
WS70_14065  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
WS70_20235  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
WS70_00780  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
WS70_00790  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
WS70_09770  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
WS70_28270  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
WS70_06235  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
WS70_00785  glycine cleavage system protein H [KO:K02437]
WS70_07630  glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
WS70_07625  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
WS70_07620  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
WS70_28000  glycerate kinase [KO:K00865] [EC:2.7.1.165]
WS70_07335  glycerate kinase [KO:K00865] [EC:2.7.1.165]
WS70_17325  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
WS70_03125  2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
WS70_22280  cupin [KO:K01569] [EC:4.1.1.2]
WS70_12710  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
WS70_25385  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
WS70_25390  sulfate ABC transporter substrate-binding protein [KO:K00123] [EC:1.17.1.9]
WS70_12705  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
WS70_25380  formate dehydrogenase [KO:K00124]
WS70_12700  formate dehydrogenase [KO:K00124]
WS70_25375  formate dehydrogenase [KO:K00127]
WS70_12695  formate dehydrogenase [KO:K00127]
WS70_04230  kynurenine formamidase [KO:K07130] [EC:3.5.1.9]
WS70_14820  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
WS70_20290  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
WS70_06030  N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
buu00010  Glycolysis / Gluconeogenesis
buu00020  Citrate cycle (TCA cycle)
buu00030  Pentose phosphate pathway
buu00053  Ascorbate and aldarate metabolism
buu00071  Fatty acid degradation
buu00230  Purine metabolism
buu00250  Alanine, aspartate and glutamate metabolism
buu00260  Glycine, serine and threonine metabolism
buu00620  Pyruvate metabolism
buu00710  Carbon fixation by Calvin cycle
buu00750  Vitamin B6 metabolism
buu00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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