KEGG   PATHWAY: caul00630
Entry
caul00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Caulobacter sp. S6
Class
Metabolism; Carbohydrate metabolism
Pathway map
caul00630  Glyoxylate and dicarboxylate metabolism
caul00630

Module
caul_M00012  Glyoxylate cycle [PATH:caul00630]
caul_M00621  Glycine cleavage system [PATH:caul00630]
caul_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:caul00630]
Other DBs
GO: 0046487 0043648
Organism
Caulobacter sp. S6 [GN:caul]
Gene
KCG34_25040  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
KCG34_18285  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
KCG34_09740  malate synthase G [KO:K01638] [EC:2.3.3.9]
KCG34_17170  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
KCG34_14085  citrate synthase/methylcitrate synthase [KO:K01647] [EC:2.3.3.1]
KCG34_14090  citrate synthase family protein [KO:K01647] [EC:2.3.3.1]
KCG34_01155  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
KCG34_18425  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
KCG34_18625  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KCG34_20770  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
KCG34_21260  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KCG34_21635  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
KCG34_02055  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KCG34_04345  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
KCG34_06155  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
KCG34_06275  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
KCG34_06310  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
KCG34_09255  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
KCG34_09475  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
KCG34_18630  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
KCG34_08565  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
KCG34_21970  MaoC family dehydratase [KO:K17865] [EC:4.2.1.55]
KCG34_01890  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
KCG34_07465  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
KCG34_25005  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
KCG34_07455  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
KCG34_07460  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
KCG34_09745  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
KCG34_09750  FAD-binding protein [KO:K11472] [EC:1.1.99.14]
KCG34_09755  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
KCG34_15795  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
KCG34_02020  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
KCG34_24635  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
KCG34_24795  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
KCG34_25305  hypothetical protein [KO:K01915] [EC:6.3.1.2]
KCG34_01790  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
KCG34_02835  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
KCG34_02875  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
KCG34_03595  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
KCG34_03990  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
KCG34_22140  gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA [KO:K00282] [EC:1.4.4.2]
KCG34_22135  gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB [KO:K00283] [EC:1.4.4.2]
KCG34_22150  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
KCG34_17240  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KCG34_02970  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
KCG34_22145  gcvH; glycine cleavage system protein GcvH [KO:K02437]
KCG34_10375  NAD(P)-dependent oxidoreductase [KO:K00042] [EC:1.1.1.60]
KCG34_02380  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
KCG34_19195  formate dehydrogenase subunit delta [KO:K00126] [EC:1.17.1.9]
KCG34_19200  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
KCG34_19205  NADH-quinone oxidoreductase subunit L [KO:K00124]
KCG34_19210  NAD(P)H-dependent oxidoreductase subunit E [KO:K00127]
KCG34_02535  kynB; arylformamidase [KO:K07130] [EC:3.5.1.9]
KCG34_11615  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
KCG34_07160  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
KCG34_02450  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
caul00010  Glycolysis / Gluconeogenesis
caul00020  Citrate cycle (TCA cycle)
caul00030  Pentose phosphate pathway
caul00053  Ascorbate and aldarate metabolism
caul00071  Fatty acid degradation
caul00230  Purine metabolism
caul00250  Alanine, aspartate and glutamate metabolism
caul00260  Glycine, serine and threonine metabolism
caul00620  Pyruvate metabolism
caul00710  Carbon fixation by Calvin cycle
caul00750  Vitamin B6 metabolism
caul00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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