KEGG   PATHWAY: ccv00020
Entry
ccv00020                    Pathway                                
Name
Citrate cycle (TCA cycle) - Campylobacter curvus
Description
The citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form of acetate, derived from glycolysis and pyruvate oxidation for carbohydrates and from beta oxidation of fatty acids. The two-carbon acetyl group in acetyl-CoA is transferred to the four-carbon compound of oxaloacetate to form the six-carbon compound of citrate. In a series of reactions two carbons in citrate are oxidized to CO2 and the reaction pathway supplies NADH for use in the oxidative phosphorylation and other metabolic processes. The pathway also supplies important precursor metabolites including 2-oxoglutarate. At the end of the cycle the remaining four-carbon part is transformed back to oxaloacetate. According to the genome sequence data, many organisms seem to lack genes for the full cycle [MD:M00009], but contain genes for specific segments [MD:M00010 M00011].
Class
Metabolism; Carbohydrate metabolism
Pathway map
ccv00020  Citrate cycle (TCA cycle)
ccv00020

Module
ccv_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ccv00020]
ccv_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ccv00020]
ccv_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ccv00020]
Other DBs
GO: 0006099
Organism
Campylobacter curvus [GN:ccv]
Gene
CCV52592_0576  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
CCV52592_1414  acnB; aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
CCV52592_1884  icd; isocitrate dehydrogenase, monomeric [KO:K00031] [EC:1.1.1.42]
CCV52592_1879  oorA; 2-oxoglutarate:acceptor oxidoreductase, alpha subunit [KO:K00174] [EC:1.2.7.3 1.2.7.11]
CCV52592_1878  oorB; 2-oxoglutarate:acceptor oxidoreductase, beta subunit [KO:K00175] [EC:1.2.7.3 1.2.7.11]
CCV52592_1877  oorC; 2-oxoglutarate:acceptor oxidoreductase, gamma subunit [KO:K00177] [EC:1.2.7.3]
CCV52592_1880  oorD; 2-oxoglutarate:acceptor oxidoreductase, delta subunit [KO:K00176] [EC:1.2.7.3]
CCV52592_1881  sucD; succinyl-CoA synthetase, alpha subunit [KO:K01902] [EC:6.2.1.5]
CCV52592_1882  sucC; succinyl-CoA synthetase, beta subunit [KO:K01903] [EC:6.2.1.5]
CCV52592_1872  mfrB; methylmenaquinol:fumarate reductase, MfrB subunit [KO:K00240] [EC:1.3.5.1]
CCV52592_1871  mfrE; methylmenaquinol:fumarate reductase, MfrE subunit [KO:K00241]
CCV52592_2205  frdA; fumarate reductase, flavoprotein subunit [KO:K00233] [EC:1.3.5.1 7.1.1.12]
CCV52592_2206  frdB; fumarate reductase, iron-sulfur subunit [KO:K25995] [EC:1.3.5.1 7.1.1.12]
CCV52592_2204  frdC; fumarate reductase, cytochrome b subunit [KO:K25996]
CCV52592_1795  fumC; fumarate hydratase, class II [KO:K01679] [EC:4.2.1.2]
CCV52592_0433  ferrirhodotorulic acid ABC transporter, inner membrane protein [KO:K01679] [EC:4.2.1.2]
CCV52592_1883  mdh; malate dehydrogenase, NAD-dependent [KO:K00024] [EC:1.1.1.37]
CCV52592_1243  mqo; malate:quinone-oxidoreductase [KO:K00116] [EC:1.1.5.4]
CCV52592_0748  pycA; pyruvate carboxylase, subunit A [KO:K01959] [EC:6.4.1.1]
CCV52592_0964  pycB; pyruvate carboxylase, subunit B [KO:K01960] [EC:6.4.1.1]
CCV52592_0965  pckA; phosphoenolpyruvate carboxykinase (ATP) [KO:K01610] [EC:4.1.1.49]
CCV52592_0916  por; pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric [KO:K03737] [EC:1.2.7.1 1.2.7.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00042  Succinate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00091  Succinyl-CoA
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00311  Isocitrate
C00417  cis-Aconitate
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C05379  Oxalosuccinate
C05381  3-Carboxy-1-hydroxypropyl-ThPP
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16254  [Dihydrolipoyllysine-residue succinyltransferase] S-succinyldihydrolipoyllysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
ccv00010  Glycolysis / Gluconeogenesis
ccv00053  Ascorbate and aldarate metabolism
ccv00061  Fatty acid biosynthesis
ccv00071  Fatty acid degradation
ccv00190  Oxidative phosphorylation
ccv00220  Arginine biosynthesis
ccv00250  Alanine, aspartate and glutamate metabolism
ccv00280  Valine, leucine and isoleucine degradation
ccv00350  Tyrosine metabolism
ccv00470  D-Amino acid metabolism
ccv00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00020   
LinkDB

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