KEGG   PATHWAY: cdip00240
Entry
cdip00240                   Pathway                                
Name
Pyrimidine metabolism - Corynebacterium diphtheriae NCTC11397
Class
Metabolism; Nucleotide metabolism
Pathway map
cdip00240  Pyrimidine metabolism
cdip00240

Module
cdip_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:cdip00240]
cdip_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:cdip00240]
Other DBs
GO: 0006220 0006213
Organism
Corynebacterium diphtheriae NCTC11397 [GN:cdip]
Gene
ERS451417_01331  carB; carbamoyl-phosphate synthase large chain [KO:K01955] [EC:6.3.5.5]
ERS451417_01332  carA; carbamoyl phosphate synthase small subunit [KO:K01956] [EC:6.3.5.5]
ERS451417_01334  pyrB; aspartate carbamoyltransferase catalytic subunit [KO:K00609] [EC:2.1.3.2]
ERS451417_01333  pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3]
ERS451417_01264  pyrD; dihydroorotate dehydrogenase 2 [KO:K00254] [EC:1.3.5.2]
ERS451417_02123  pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
ERS451417_01330  pyrF; orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
ERS451417_01531  pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
ERS451417_01799  ndk; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
ERS451417_00587  maf; Maf-like protein [KO:K06287] [EC:3.6.1.-]
ERS451417_01194  cmk; cytidylate kinase [KO:K00945] [EC:2.7.4.25]
ERS451417_01706  nagD_2; putative N-acetylglucosamine related protein [KO:K02566] [EC:3.1.3.5]
ERS451417_01773  iunH; inosine-uridine preferring nucleoside hydrolase [KO:K25589] [EC:3.2.2.2 3.2.2.3]
ERS451417_00575  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
ERS451417_01335  pyrR; pyrimidine regulatory protein [KO:K02825] [EC:2.4.2.9]
ERS451417_01992  cdd; Cytidine deaminase [KO:K01489] [EC:3.5.4.5]
ERS451417_00388  nrdD; anaerobic ribonucleoside triphosphate reductase [KO:K21636] [EC:1.1.98.6]
ERS451417_02179  dcd; Deoxycytidine triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
ERS451417_01867  nrdE; ribonucleotide-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
ERS451417_01865  nrdF1; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
ERS451417_01944  nrdF2; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
ERS451417_00628  tmk; thymidylate kinase [KO:K00943] [EC:2.7.4.9]
ERS451417_01423  dut2; deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
ERS451417_01123  dut1; deoxyuridine 5'-triphosphate nucleotidohydrolase [KO:K01520] [EC:3.6.1.23]
ERS451417_01991  deoA; Thymidine phosphorylase [KO:K00758] [EC:2.4.2.4]
ERS451417_00732  thyA; thymidylate synthase [KO:K00560] [EC:2.1.1.45]
ERS451417_01490  thyX; FAD-dependent thymidylate synthase [KO:K03465] [EC:2.1.1.148]
ERS451417_01102  thyX1; FAD-dependent thymidylate synthase [KO:K03465] [EC:2.1.1.148]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
cdip00030  Pentose phosphate pathway
cdip00220  Arginine biosynthesis
cdip00250  Alanine, aspartate and glutamate metabolism
cdip00280  Valine, leucine and isoleucine degradation
KO pathway
ko00240   
LinkDB

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