KEGG   PATHWAY: ceb03430
Entry
ceb03430                    Pathway                                
Name
Mismatch repair - Cellvibrio sp. PSBB023
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
ceb03430  Mismatch repair
ceb03430

Other DBs
GO: 0006298
Organism
Cellvibrio sp. PSBB023 [GN:ceb]
Gene
B0D95_05790  DNA mismatch repair protein MutS [KO:K03555]
B0D95_11425  DNA mismatch repair protein MutL [KO:K03572]
B0D95_13685  DNA helicase II [KO:K03657] [EC:5.6.2.4]
B0D95_18545  Fis family transcriptional regulator [KO:K03657] [EC:5.6.2.4]
B0D95_08605  exodeoxyribonuclease I [KO:K01141] [EC:3.1.11.1]
B0D95_07305  exodeoxyribonuclease VII large subunit [KO:K03601] [EC:3.1.11.6]
B0D95_16535  exodeoxyribonuclease VII small subunit [KO:K03602] [EC:3.1.11.6]
B0D95_07400  single-stranded-DNA-specific exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
B0D95_18135  single-stranded DNA-binding protein [KO:K03111]
B0D95_18395  hypothetical protein [KO:K03111]
B0D95_01720  DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
B0D95_14790  DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
B0D95_05925  DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
B0D95_17400  DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
B0D95_05395  DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
B0D95_09050  DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
B0D95_05245  DNA polymerase III subunit epsilon [KO:K02342] [EC:2.7.7.7]
B0D95_03210  DNA polymerase III subunit chi [KO:K02339] [EC:2.7.7.7]
B0D95_04905  ligA; DNA ligase (NAD(+)) LigA [KO:K01972] [EC:6.5.1.2]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   
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