KEGG   PATHWAY: cje00020
Entry
cje00020                    Pathway                                
Name
Citrate cycle (TCA cycle) - Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819
Description
The citrate cycle (TCA cycle, Krebs cycle) is an important aerobic pathway for the final steps of the oxidation of carbohydrates and fatty acids. The cycle starts with acetyl-CoA, the activated form of acetate, derived from glycolysis and pyruvate oxidation for carbohydrates and from beta oxidation of fatty acids. The two-carbon acetyl group in acetyl-CoA is transferred to the four-carbon compound of oxaloacetate to form the six-carbon compound of citrate. In a series of reactions two carbons in citrate are oxidized to CO2 and the reaction pathway supplies NADH for use in the oxidative phosphorylation and other metabolic processes. The pathway also supplies important precursor metabolites including 2-oxoglutarate. At the end of the cycle the remaining four-carbon part is transformed back to oxaloacetate. According to the genome sequence data, many organisms seem to lack genes for the full cycle [MD:M00009], but contain genes for specific segments [MD:M00010 M00011].
Class
Metabolism; Carbohydrate metabolism
Pathway map
cje00020  Citrate cycle (TCA cycle)
cje00020

Module
cje_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:cje00020]
cje_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:cje00020]
cje_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:cje00020]
Other DBs
GO: 0006099
Organism
Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 [GN:cje]
Gene
Cj1682c  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
Cj0835c  acnB; aconitate hydratase B [KO:K01682] [EC:4.2.1.3 4.2.1.99]
Cj0531  icd; isocitrate dehydrogenase [KO:K00031] [EC:1.1.1.42]
Cj0536  oorA; 2-oxoglutarate-acceptor oxidoreductase subunit OorA [KO:K00174] [EC:1.2.7.3 1.2.7.11]
Cj0537  oorB; 2-oxoglutarate-acceptor oxidoreductase subunit OorB [KO:K00175] [EC:1.2.7.3 1.2.7.11]
Cj0538  oorC; 2-oxoglutarate-acceptor oxidoreductase subunit OorC [KO:K00177] [EC:1.2.7.3]
Cj0535  oorD; 2-oxoglutarate-acceptor oxidoreductase subunit OorD [KO:K00176] [EC:1.2.7.3]
Cj0534  sucD; succinyl-CoA synthetase subunit alpha [KO:K01902] [EC:6.2.1.5]
Cj0533  sucC; succinyl-CoA ligase subunit beta [KO:K01903] [EC:6.2.1.5]
Cj0438  sdhB; succinate dehydrogenase iron-sulfur protein [KO:K00240] [EC:1.3.5.1]
Cj0439  sdhC; succinate dehydrogenase subunit C [KO:K00241]
Cj0409  frdA; fumarate reductase flavoprotein subunit [KO:K00233] [EC:1.3.5.1 7.1.1.12]
Cj0410  frdB; fumarate reductase iron-sulfur subunit [KO:K25995] [EC:1.3.5.1 7.1.1.12]
Cj0408  frdC; fumarate reductase cytochrome B subunit [KO:K25996]
Cj1364c  fumC; fumarate hydratase [KO:K01679] [EC:4.2.1.2]
Cj0532  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
Cj0393c  mqo; malate:quinone oxidoreductase [KO:K00116] [EC:1.1.5.4]
Cj1037c  pycA; acetyl-CoA carboxylase subunit A [KO:K01959] [EC:6.4.1.1]
Cj0933c  pycB; pyruvate carboxylase B subunit [KO:K01960] [EC:6.4.1.1]
Cj0932c  pckA; phosphoenolpyruvate carboxykinase [KO:K01610] [EC:4.1.1.49]
Cj1476c  pyruvate-flavodoxin oxidoreductase [KO:K03737] [EC:1.2.7.1 1.2.7.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00026  2-Oxoglutarate
C00036  Oxaloacetate
C00042  Succinate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00091  Succinyl-CoA
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00311  Isocitrate
C00417  cis-Aconitate
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C05379  Oxalosuccinate
C05381  3-Carboxy-1-hydroxypropyl-ThPP
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16254  [Dihydrolipoyllysine-residue succinyltransferase] S-succinyldihydrolipoyllysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
cje00010  Glycolysis / Gluconeogenesis
cje00061  Fatty acid biosynthesis
cje00190  Oxidative phosphorylation
cje00220  Arginine biosynthesis
cje00250  Alanine, aspartate and glutamate metabolism
cje00280  Valine, leucine and isoleucine degradation
cje00350  Tyrosine metabolism
cje00470  D-Amino acid metabolism
cje00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00020   
LinkDB

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