KEGG   PATHWAY: clup00630
Entry
clup00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Colletotrichum lupini
Class
Metabolism; Carbohydrate metabolism
Pathway map
clup00630  Glyoxylate and dicarboxylate metabolism
clup00630

Module
clup_M00012  Glyoxylate cycle [PATH:clup00630]
clup_M00621  Glycine cleavage system [PATH:clup00630]
Other DBs
GO: 0046487 0043648
Organism
Colletotrichum lupini [GN:clup]
Gene
CLUP02_09416  isocitrate lyase family protein [KO:K01637] [EC:4.1.3.1]
CLUP02_10778  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
CLUP02_01310  acetate-CoA ligase [KO:K01895] [EC:6.2.1.1]
CLUP02_08604  malate synthase [KO:K01638] [EC:2.3.3.9]
CLUP02_15872  malate dehydrogenase [KO:K00026] [EC:1.1.1.37]
CLUP02_03575  malate dehydrogenase [KO:K00026] [EC:1.1.1.37]
CLUP02_07003  malate dehydrogenase [KO:K00026] [EC:1.1.1.37]
CLUP02_15099  citrate synthase [KO:K01647] [EC:2.3.3.1]
CLUP02_00684  citrate synthase [KO:K01647] [EC:2.3.3.1]
CLUP02_16843  uncharacterized protein [KO:K01647] [EC:2.3.3.1]
CLUP02_09417  2-methylcitrate synthase [KO:K01647] [EC:2.3.3.1]
CLUP02_14234  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
CLUP02_12452  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
CLUP02_15094  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
CLUP02_13638  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
CLUP02_16253  FMN-dependent dehydrogenase [KO:K11517] [EC:1.1.3.15]
CLUP02_17054  catalase [KO:K03781] [EC:1.11.1.6]
CLUP02_03311  catalase [KO:K03781] [EC:1.11.1.6]
CLUP02_04116  catalase [KO:K03781] [EC:1.11.1.6]
CLUP02_04518  catalase [KO:K03781] [EC:1.11.1.6]
CLUP02_05160  D-isomer specific 2-hydroxyacid dehydrogenase [KO:K00015] [EC:1.1.1.26]
CLUP02_07007  uncharacterized protein [KO:K00015] [EC:1.1.1.26]
CLUP02_00859  alanine-glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
CLUP02_09413  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
CLUP02_10933  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
CLUP02_17429  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
CLUP02_06253  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
CLUP02_09265  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
CLUP02_12451  glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
CLUP02_06189  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
CLUP02_07797  glycine cleavage system H protein [KO:K02437]
CLUP02_15834  glycerate kinase [KO:K00865] [EC:2.7.1.165]
CLUP02_17371  D-glycerate 3-kinase [KO:K15918] [EC:2.7.1.31]
CLUP02_06836  uncharacterized protein [KO:K15918] [EC:2.7.1.31]
CLUP02_15676  dihydrodipicolinate synthetase [KO:K18123] [EC:4.1.3.16]
CLUP02_01428  uncharacterized protein [KO:K18123] [EC:4.1.3.16]
CLUP02_16425  dihydrodipicolinate synthetase [KO:K18123] [EC:4.1.3.16]
CLUP02_16731  dihydrodipicolinate synthetase [KO:K18123] [EC:4.1.3.16]
CLUP02_02715  dihydrodipicolinate synthetase [KO:K18123] [EC:4.1.3.16]
CLUP02_01662  dihydrodipicolinate synthase [KO:K18123] [EC:4.1.3.16]
CLUP02_10561  oxalate decarboxylase [KO:K01569] [EC:4.1.1.2]
CLUP02_07781  D-isomer specific 2-hydroxyacid dehydrogenase [KO:K00122] [EC:1.17.1.9]
CLUP02_08360  uncharacterized protein [KO:K14263] [EC:3.5.1.9]
CLUP02_04279  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
CLUP02_12619  acetamidase/Formamidase [KO:K01455] [EC:3.5.1.49]
CLUP02_11096  AMP-binding enzyme [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
clup00010  Glycolysis / Gluconeogenesis
clup00020  Citrate cycle (TCA cycle)
clup00030  Pentose phosphate pathway
clup00053  Ascorbate and aldarate metabolism
clup00071  Fatty acid degradation
clup00230  Purine metabolism
clup00250  Alanine, aspartate and glutamate metabolism
clup00260  Glycine, serine and threonine metabolism
clup00620  Pyruvate metabolism
clup00710  Carbon fixation by Calvin cycle
clup00750  Vitamin B6 metabolism
clup00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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