KEGG   PATHWAY: cmax00630
Entry
cmax00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Cucurbita maxima (winter squash)
Class
Metabolism; Carbohydrate metabolism
Pathway map
cmax00630  Glyoxylate and dicarboxylate metabolism
cmax00630

Module
cmax_M00012  Glyoxylate cycle [PATH:cmax00630]
cmax_M00532  Photorespiration [PATH:cmax00630]
cmax_M00621  Glycine cleavage system [PATH:cmax00630]
Other DBs
GO: 0046487 0043648
Organism
Cucurbita maxima (winter squash) [GN:cmax]
Gene
111469780  isocitrate lyase-like [KO:K01637] [EC:4.1.3.1]
111484071  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
111482451  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like isoform X1 [KO:K01895] [EC:6.2.1.1]
111489370  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like [KO:K01895] [EC:6.2.1.1]
111470789  acetate/butyrate--CoA ligase AAE7, peroxisomal-like [KO:K01913] [EC:6.2.1.1 6.2.1.2]
111479361  acetate/butyrate--CoA ligase AAE7, peroxisomal-like [KO:K01913] [EC:6.2.1.1 6.2.1.2]
111474294  acetate/butyrate--CoA ligase AAE7, peroxisomal-like [KO:K01913] [EC:6.2.1.1 6.2.1.2]
111495138  malate synthase, glyoxysomal [KO:K01638] [EC:2.3.3.9]
111494766  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
111479208  malate dehydrogenase-like isoform X1 [KO:K00025] [EC:1.1.1.37]
111498914  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
111482765  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
111496925  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
111484814  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
111471234  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
111477593  malate dehydrogenase, glyoxysomal-like isoform X1 [KO:K00026] [EC:1.1.1.37]
111480781  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
111483841  citrate synthase, glyoxysomal [KO:K01647] [EC:2.3.3.1]
111488392  citrate synthase, mitochondrial-like [KO:K01647] [EC:2.3.3.1]
111469653  citrate synthase, glyoxysomal-like [KO:K01647] [EC:2.3.3.1]
111497935  citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
111477733  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
111497319  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
111485932  aconitate hydratase, cytoplasmic [KO:K01681] [EC:4.2.1.3]
111468105  aconitate hydratase, cytoplasmic-like [KO:K01681] [EC:4.2.1.3]
111468204  acetyl-CoA acetyltransferase, cytosolic 1 [KO:K00626] [EC:2.3.1.9]
111486473  LOW QUALITY PROTEIN: acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
111471655  acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
111497126  (S)-2-hydroxy-acid oxidase GLO1-like [KO:K11517] [EC:1.1.3.15]
111479940  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like isoform X1 [KO:K11517] [EC:1.1.3.15]
111479944  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like isoform X1 [KO:K11517] [EC:1.1.3.15]
111478373  (S)-2-hydroxy-acid oxidase GLO1 [KO:K11517] [EC:1.1.3.15]
111492921  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like isoform X1 [KO:K11517] [EC:1.1.3.15]
111496591  catalase isozyme 3 [KO:K03781] [EC:1.11.1.6]
111480906  catalase isozyme 1 [KO:K03781] [EC:1.11.1.6]
111476689  catalase isozyme 1-like [KO:K03781] [EC:1.11.1.6]
111493962  catalase isozyme 2 [KO:K03781] [EC:1.11.1.6]
111472755  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
111472757  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
111493164  glyoxylate/succinic semialdehyde reductase 2, chloroplastic-like [KO:K18121] [EC:1.1.1.79 1.1.1.-]
111492780  glyoxylate/succinic semialdehyde reductase 2, chloroplastic-like [KO:K18121] [EC:1.1.1.79 1.1.1.-]
111479971  glyoxylate/succinic semialdehyde reductase 2, chloroplastic-like [KO:K18121] [EC:1.1.1.79 1.1.1.-]
111468468  glycerate dehydrogenase isoform X1 [KO:K15893] [EC:1.1.1.29]
111486395  glycerate dehydrogenase-like [KO:K15893] [EC:1.1.1.29]
111498614  phosphoglycolate phosphatase 1B, chloroplastic-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
111485013  phosphoglycolate phosphatase 1B, chloroplastic-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
111496999  phosphoglycolate phosphatase 2-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
111477933  phosphoglycolate phosphatase 2 isoform X1 [KO:K19269] [EC:3.1.3.18 3.1.3.48]
111494870  uncharacterized protein LOC111494870 [KO:K01601] [EC:4.1.1.39]
CYL43_pgp058  rbcL; ribulose-1 [KO:K01601] [EC:4.1.1.39]
111484459  ribulose bisphosphate carboxylase small chain, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
111467689  ribulose bisphosphate carboxylase small chain, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
111484368  serine--glyoxylate aminotransferase-like [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
111485474  serine--glyoxylate aminotransferase-like [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
111497715  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
111466383  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
111483054  glutamate--glyoxylate aminotransferase 2-like [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
111483066  glutamate--glyoxylate aminotransferase 2-like [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
111491846  glutamate--glyoxylate aminotransferase 2-like [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
111482225  ferredoxin-dependent glutamate synthase, chloroplastic-like isoform X1 [KO:K00284] [EC:1.4.7.1]
111469981  ferredoxin-dependent glutamate synthase, chloroplastic isoform X1 [KO:K00284] [EC:1.4.7.1]
111497840  glutamine synthetase nodule isozyme-like isoform X1 [KO:K01915] [EC:6.3.1.2]
111489064  glutamine synthetase cytosolic isozyme-like [KO:K01915] [EC:6.3.1.2]
111488088  glutamine synthetase nodule isozyme-like [KO:K01915] [EC:6.3.1.2]
111492678  glutamine synthetase cytosolic isozyme isoform X1 [KO:K01915] [EC:6.3.1.2]
111478799  type-1 glutamine synthetase 1-like isoform X1 [KO:K01915] [EC:6.3.1.2]
111482166  glutamine synthetase cytosolic isozyme-like [KO:K01915] [EC:6.3.1.2]
111479038  glutamine synthetase leaf isozyme, chloroplastic-like [KO:K01915] [EC:6.3.1.2]
111472242  glutamine synthetase leaf isozyme, chloroplastic [KO:K01915] [EC:6.3.1.2]
111479489  serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
111499000  serine hydroxymethyltransferase 4-like [KO:K00600] [EC:2.1.2.1]
111497199  serine hydroxymethyltransferase, mitochondrial [KO:K00600] [EC:2.1.2.1]
111482831  serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
111478793  serine hydroxymethyltransferase, mitochondrial [KO:K00600] [EC:2.1.2.1]
111483109  serine hydroxymethyltransferase 3, chloroplastic-like [KO:K00600] [EC:2.1.2.1]
111495956  serine hydroxymethyltransferase 2, mitochondrial-like isoform X1 [KO:K00600] [EC:2.1.2.1]
111495957  serine hydroxymethyltransferase 2, mitochondrial [KO:K00600] [EC:2.1.2.1]
111494472  serine hydroxymethyltransferase 4 [KO:K00600] [EC:2.1.2.1]
111480261  serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
111479708  serine hydroxymethyltransferase 3, chloroplastic-like [KO:K00600] [EC:2.1.2.1]
111491701  glycine dehydrogenase (decarboxylating), mitochondrial-like [KO:K00281] [EC:1.4.4.2]
111495899  glycine dehydrogenase (decarboxylating), mitochondrial [KO:K00281] [EC:1.4.4.2]
111490006  aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
111495448  aminomethyltransferase, mitochondrial-like [KO:K00605] [EC:2.1.2.10]
111494297  dihydrolipoyl dehydrogenase, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
111499118  dihydrolipoyl dehydrogenase 2, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
111470800  dihydrolipoyl dehydrogenase 1, mitochondrial [KO:K00382] [EC:1.8.1.4]
111490918  glycine cleavage system H protein 3, mitochondrial-like [KO:K02437]
111470652  glycine cleavage system H protein, mitochondrial-like [KO:K02437]
111495696  glycine cleavage system H protein 2, mitochondrial-like [KO:K02437]
111495697  glycine cleavage system H protein 2, mitochondrial-like isoform X1 [KO:K02437]
111488631  D-glycerate 3-kinase, chloroplastic isoform X1 [KO:K15918] [EC:2.7.1.31]
111497972  D-glycerate 3-kinase, chloroplastic-like isoform X1 [KO:K15918] [EC:2.7.1.31]
111481834  formate dehydrogenase, mitochondrial isoform X1 [KO:K00122] [EC:1.17.1.9]
111465065  formyltetrahydrofolate deformylase 1, mitochondrial-like [KO:K01433] [EC:3.5.1.10]
111498446  formyltetrahydrofolate deformylase 2, mitochondrial-like [KO:K01433] [EC:3.5.1.10]
111477820  uncharacterized protein LOC111477820 isoform X1 [KO:K01455] [EC:3.5.1.49]
111471512  oxalate--CoA ligase-like [KO:K22133] [EC:6.2.1.8]
111490818  oxalate--CoA ligase-like [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
cmax00010  Glycolysis / Gluconeogenesis
cmax00020  Citrate cycle (TCA cycle)
cmax00030  Pentose phosphate pathway
cmax00053  Ascorbate and aldarate metabolism
cmax00071  Fatty acid degradation
cmax00230  Purine metabolism
cmax00250  Alanine, aspartate and glutamate metabolism
cmax00260  Glycine, serine and threonine metabolism
cmax00620  Pyruvate metabolism
cmax00710  Carbon fixation by Calvin cycle
cmax00750  Vitamin B6 metabolism
cmax00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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