KEGG   PATHWAY: cmo00630
Entry
cmo00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Cucumis melo (muskmelon)
Class
Metabolism; Carbohydrate metabolism
Pathway map
cmo00630  Glyoxylate and dicarboxylate metabolism
cmo00630

Module
cmo_M00012  Glyoxylate cycle [PATH:cmo00630]
cmo_M00621  Glycine cleavage system [PATH:cmo00630]
Other DBs
GO: 0046487 0043648
Organism
Cucumis melo (muskmelon) [GN:cmo]
Gene
103495946  isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
103502952  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like [KO:K01895] [EC:6.2.1.1]
103491691  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal isoform X1 [KO:K01895] [EC:6.2.1.1]
103483883  acetate--CoA ligase CCL3 isoform X2 [KO:K01913] [EC:6.2.1.1 6.2.1.2]
103484282  malate synthase, glyoxysomal [KO:K01638] [EC:2.3.3.9]
103483128  malate dehydrogenase, cytoplasmic-like isoform X1 [KO:K00025] [EC:1.1.1.37]
103499421  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
103492923  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
103484892  malate dehydrogenase, glyoxysomal isoform X1 [KO:K00026] [EC:1.1.1.37]
103494326  malate dehydrogenase, chloroplastic isoform X1 [KO:K00026] [EC:1.1.1.37]
103492856  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
103499882  citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
103496336  citrate synthase, glyoxysomal [KO:K01647] [EC:2.3.3.1]
103495599  aconitate hydratase, cytoplasmic [KO:K01681] [EC:4.2.1.3]
103485166  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
103500505  acetyl-CoA acetyltransferase, cytosolic 1 [KO:K00626] [EC:2.3.1.9]
103502200  acetyl-CoA acetyltransferase, cytosolic 1 isoform X1 [KO:K00626] [EC:2.3.1.9]
103484358  glycolate oxidase 1 isoform X1 [KO:K11517] [EC:1.1.3.15]
103499182  peroxisomal (S)-2-hydroxyacid oxidase GLO4-like [KO:K11517] [EC:1.1.3.15]
103499183  peroxisomal (S)-2-hydroxyacid oxidase GLO4-like [KO:K11517] [EC:1.1.3.15]
103499256  peroxisomal (S)-2-hydroxyacid oxidase GLO4-like isoform X1 [KO:K11517] [EC:1.1.3.15]
103502619  catalase isozyme 3 [KO:K03781] [EC:1.11.1.6]
103493813  catalase isozyme 1-like [KO:K03781] [EC:1.11.1.6]
103493812  catalase isozyme 1 [KO:K03781] [EC:1.11.1.6]
103483325  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
103483318  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
103483323  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
103484170  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
103490043  glyoxylate/succinic semialdehyde reductase 2, chloroplastic isoform X1 [KO:K18121] [EC:1.1.1.79 1.1.1.-]
103490045  glyoxylate/succinic semialdehyde reductase 2, chloroplastic-like [KO:K18121] [EC:1.1.1.79 1.1.1.-]
103490283  glycerate dehydrogenase [KO:K15893] [EC:1.1.1.29]
103485219  phosphoglycolate phosphatase 2 [KO:K19269] [EC:3.1.3.18 3.1.3.48]
103487218  phosphoglycolate phosphatase 1A, chloroplastic-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
103489286  ribulose bisphosphate carboxylase small subunit, chloroplastic [KO:K01602] [EC:4.1.1.39]
103492000  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
103491481  serine--glyoxylate aminotransferase-like [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
103487718  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
103489552  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
103504480  glutamate--glyoxylate aminotransferase 2-like [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
103489544  glutamate--glyoxylate aminotransferase 2-like [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
103504412  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
103486888  ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial [KO:K00284] [EC:1.4.7.1]
103499973  glutamine synthetase nodule isozyme-like [KO:K01915] [EC:6.3.1.2]
103499306  glutamine synthetase nodule isozyme-like [KO:K01915] [EC:6.3.1.2]
103500842  uncharacterized protein LOC103500842 [KO:K01915] [EC:6.3.1.2]
103496807  GS1; glutamine synthetase cytosolic isozyme [KO:K01915] [EC:6.3.1.2]
103483759  glutamine synthetase leaf isozyme, chloroplastic [KO:K01915] [EC:6.3.1.2]
103487552  serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
103484914  serine hydroxymethyltransferase, mitochondrial [KO:K00600] [EC:2.1.2.1]
103493017  serine hydroxymethyltransferase 3, chloroplastic [KO:K00600] [EC:2.1.2.1]
103488144  serine hydroxymethyltransferase 2, mitochondrial isoform X1 [KO:K00600] [EC:2.1.2.1]
103496952  6F11; serine hydroxymethyltransferase 4 [KO:K00600] [EC:2.1.2.1]
103496109  serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
103487785  glycine dehydrogenase (decarboxylating), mitochondrial [KO:K00281] [EC:1.4.4.2]
103485188  aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
103483908  leghemoglobin reductase [KO:K00382] [EC:1.8.1.4]
103497765  dihydrolipoyl dehydrogenase, mitochondrial isoform X1 [KO:K00382] [EC:1.8.1.4]
103497796  dihydrolipoyl dehydrogenase 1, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
103503516  glycine cleavage system H protein, mitochondrial [KO:K02437]
103498256  glycine cleavage system H protein 2, mitochondrial [KO:K02437]
103499753  D-glycerate 3-kinase, chloroplastic isoform X1 [KO:K15918] [EC:2.7.1.31]
103487087  formate dehydrogenase, mitochondrial [KO:K00122] [EC:1.17.1.9]
103490874  formyltetrahydrofolate deformylase 1, mitochondrial [KO:K01433] [EC:3.5.1.10]
103484841  uncharacterized protein LOC103484841 isoform X1 [KO:K01455] [EC:3.5.1.49]
103482575  oxalate--CoA ligase-like [KO:K22133] [EC:6.2.1.8]
103482735  probable CoA ligase CCL9 [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
cmo00010  Glycolysis / Gluconeogenesis
cmo00020  Citrate cycle (TCA cycle)
cmo00030  Pentose phosphate pathway
cmo00053  Ascorbate and aldarate metabolism
cmo00071  Fatty acid degradation
cmo00230  Purine metabolism
cmo00250  Alanine, aspartate and glutamate metabolism
cmo00260  Glycine, serine and threonine metabolism
cmo00620  Pyruvate metabolism
cmo00710  Carbon fixation by Calvin cycle
cmo00750  Vitamin B6 metabolism
cmo00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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