KEGG   PATHWAY: csav00630
Entry
csav00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Cannabis sativa (hemp)
Class
Metabolism; Carbohydrate metabolism
Pathway map
csav00630  Glyoxylate and dicarboxylate metabolism
csav00630

Module
csav_M00012  Glyoxylate cycle [PATH:csav00630]
csav_M00621  Glycine cleavage system [PATH:csav00630]
Other DBs
GO: 0046487 0043648
Organism
Cannabis sativa (hemp) [GN:csav]
Gene
115698845  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
115698761  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal [KO:K01895] [EC:6.2.1.1]
115724162  acetate/butyrate--CoA ligase AAE7, peroxisomal isoform X1 [KO:K01913] [EC:6.2.1.1 6.2.1.2]
115725057  malate synthase, glyoxysomal [KO:K01638] [EC:2.3.3.9]
115708841  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
115723449  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
115704224  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
115697281  malate dehydrogenase 1, mitochondrial [KO:K00026] [EC:1.1.1.37]
115712229  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
115723265  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
115699414  LOW QUALITY PROTEIN: citrate synthase, glyoxysomal [KO:K01647] [EC:2.3.3.1]
115724911  citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
115699691  aconitate hydratase, cytoplasmic [KO:K01681] [EC:4.2.1.3]
115712750  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
115707261  probable acetyl-CoA acetyltransferase, cytosolic 2 [KO:K00626] [EC:2.3.1.9]
115699135  acetyl-CoA acetyltransferase, cytosolic 1 [KO:K00626] [EC:2.3.1.9]
115707132  peroxisomal (S)-2-hydroxy-acid oxidase GLO4 isoform X1 [KO:K11517] [EC:1.1.3.15]
115707133  peroxisomal (S)-2-hydroxy-acid oxidase GLO4 isoform X1 [KO:K11517] [EC:1.1.3.15]
115697365  (S)-2-hydroxy-acid oxidase GLO1 isoform X1 [KO:K11517] [EC:1.1.3.15]
115713783  catalase isozyme 2 [KO:K03781] [EC:1.11.1.6]
115713788  catalase-2 [KO:K03781] [EC:1.11.1.6]
115709755  catalase isozyme 2 [KO:K03781] [EC:1.11.1.6]
115717954  glyoxylate/hydroxypyruvate reductase HPR3 [KO:K15919] [EC:1.1.1.79 1.1.1.81]
115717263  glyoxylate/hydroxypyruvate reductase HPR3 [KO:K15919] [EC:1.1.1.79 1.1.1.81]
115704860  glyoxylate/hydroxypyruvate reductase HPR3 [KO:K15919] [EC:1.1.1.79 1.1.1.81]
115707107  glyoxylate/hydroxypyruvate reductase HPR3 isoform X1 [KO:K15919] [EC:1.1.1.79 1.1.1.81]
115706986  glyoxylate/succinic semialdehyde reductase 2, chloroplastic-like [KO:K18121] [EC:1.1.1.79 1.1.1.-]
115706988  glyoxylate/succinic semialdehyde reductase 2, chloroplastic-like [KO:K18121] [EC:1.1.1.79 1.1.1.-]
115704903  glycerate dehydrogenase [KO:K15893] [EC:1.1.1.29]
115719042  phosphoglycolate phosphatase 1B, chloroplastic [KO:K19269] [EC:3.1.3.18 3.1.3.48]
115707244  phosphoglycolate phosphatase 2 [KO:K19269] [EC:3.1.3.18 3.1.3.48]
115707245  phosphoglycolate phosphatase 2-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
115716971  ribulose bisphosphate carboxylase small chain, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
115722832  ribulose bisphosphate carboxylase small chain, chloroplastic-like isoform X1 [KO:K01602] [EC:4.1.1.39]
115714527  ribulose bisphosphate carboxylase small chain, chloroplastic [KO:K01602] [EC:4.1.1.39]
115695768  ribulose bisphosphate carboxylase small chain clone 512 [KO:K01602] [EC:4.1.1.39]
115725363  ribulose bisphosphate carboxylase small chain clone 512 [KO:K01602] [EC:4.1.1.39]
115699360  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
115712801  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
115699366  ferredoxin-dependent glutamate synthase, chloroplastic [KO:K00284] [EC:1.4.7.1]
115722196  glutamine synthetase leaf isozyme, chloroplastic [KO:K01915] [EC:6.3.1.2]
115715831  glutamine synthetase nodule isozyme [KO:K01915] [EC:6.3.1.2]
115722401  LOW QUALITY PROTEIN: serine hydroxymethyltransferase 4 [KO:K00600] [EC:2.1.2.1]
115695931  serine hydroxymethyltransferase 7 [KO:K00600] [EC:2.1.2.1]
115697435  serine hydroxymethyltransferase 3, chloroplastic [KO:K00600] [EC:2.1.2.1]
115699010  serine hydroxymethyltransferase 7 [KO:K00600] [EC:2.1.2.1]
115707082  glycine dehydrogenase (decarboxylating), mitochondrial [KO:K00281] [EC:1.4.4.2]
115707738  aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
115722513  dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
115722255  dihydrolipoyl dehydrogenase 2, chloroplastic [KO:K00382] [EC:1.8.1.4]
115723412  dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
115717243  glycine cleavage system H protein, mitochondrial [KO:K02437]
115697973  glycine cleavage system H protein 2, mitochondrial [KO:K02437]
115705285  D-glycerate 3-kinase, chloroplastic isoform X1 [KO:K15918] [EC:2.7.1.31]
115698580  formate dehydrogenase, mitochondrial [KO:K00122] [EC:1.17.1.9]
115717339  formyltetrahydrofolate deformylase 2, mitochondrial [KO:K01433] [EC:3.5.1.10]
115713064  uncharacterized protein LOC115713064 isoform X1 [KO:K01455] [EC:3.5.1.49]
115716006  oxalate--CoA ligase [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
csav00010  Glycolysis / Gluconeogenesis
csav00020  Citrate cycle (TCA cycle)
csav00030  Pentose phosphate pathway
csav00053  Ascorbate and aldarate metabolism
csav00071  Fatty acid degradation
csav00230  Purine metabolism
csav00250  Alanine, aspartate and glutamate metabolism
csav00260  Glycine, serine and threonine metabolism
csav00620  Pyruvate metabolism
csav00710  Carbon fixation in photosynthetic organisms
csav00750  Vitamin B6 metabolism
csav00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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