KEGG   PATHWAY: csin00630
Entry
csin00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Camellia sinensis (tea plant)
Class
Metabolism; Carbohydrate metabolism
Pathway map
csin00630  Glyoxylate and dicarboxylate metabolism
csin00630

Module
csin_M00012  Glyoxylate cycle [PATH:csin00630]
csin_M00532  Photorespiration [PATH:csin00630]
csin_M00621  Glycine cleavage system [PATH:csin00630]
Other DBs
GO: 0046487 0043648
Organism
Camellia sinensis (tea plant) [GN:csin]
Gene
114266645  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
114318853  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like [KO:K01895] [EC:6.2.1.1]
114280129  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like [KO:K01895] [EC:6.2.1.1]
114269396  acetate/butyrate--CoA ligase AAE7, peroxisomal-like [KO:K01913] [EC:6.2.1.1 6.2.1.2]
114292547  acetate/butyrate--CoA ligase AAE7, peroxisomal-like [KO:K01913] [EC:6.2.1.1 6.2.1.2]
114316045  malate synthase, glyoxysomal [KO:K01638] [EC:2.3.3.9]
114318188  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
114264061  malate dehydrogenase-like [KO:K00025] [EC:1.1.1.37]
114274248  malate dehydrogenase-like [KO:K00025] [EC:1.1.1.37]
114297464  LOW QUALITY PROTEIN: malate dehydrogenase 2, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
114279597  malate dehydrogenase 2, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
114279625  malate dehydrogenase 2, cytoplasmic-like isoform X1 [KO:K00025] [EC:1.1.1.37]
114323322  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
114319347  malate dehydrogenase, chloroplastic-like isoform X1 [KO:K00026] [EC:1.1.1.37]
114319369  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
114289779  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
114291262  malate dehydrogenase, chloroplastic-like isoform X1 [KO:K00026] [EC:1.1.1.37]
114294559  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
114298316  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
114279255  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
114310501  citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
114304692  citrate synthase, mitochondrial-like [KO:K01647] [EC:2.3.3.1]
114272994  citrate synthase, mitochondrial-like [KO:K01647] [EC:2.3.3.1]
114294490  citrate synthase, mitochondrial-like [KO:K01647] [EC:2.3.3.1]
114255790  citrate synthase, glyoxysomal [KO:K01647] [EC:2.3.3.1]
114260938  aconitate hydratase, cytoplasmic-like [KO:K01681] [EC:4.2.1.3]
114263909  aconitate hydratase, cytoplasmic isoform X1 [KO:K01681] [EC:4.2.1.3]
114313068  acetyl-CoA acetyltransferase, cytosolic 1-like isoform X1 [KO:K00626] [EC:2.3.1.9]
114318929  acetyl-CoA acetyltransferase, cytosolic 1 [KO:K00626] [EC:2.3.1.9]
114287927  acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
114288641  acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
114306685  (S)-2-hydroxy-acid oxidase GLO1-like isoform X1 [KO:K11517] [EC:1.1.3.15]
114306994  (S)-2-hydroxy-acid oxidase GLO1 isoform X1 [KO:K11517] [EC:1.1.3.15]
114319991  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like isoform X1 [KO:K11517] [EC:1.1.3.15]
114320058  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like isoform X1 [KO:K11517] [EC:1.1.3.15]
114260822  (S)-2-hydroxy-acid oxidase GLO1-like [KO:K11517] [EC:1.1.3.15]
114303062  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like [KO:K11517] [EC:1.1.3.15]
114292413  (S)-2-hydroxy-acid oxidase GLO1-like [KO:K11517] [EC:1.1.3.15]
114275286  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like isoform X1 [KO:K11517] [EC:1.1.3.15]
114275304  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like [KO:K11517] [EC:1.1.3.15]
114297529  peroxisomal (S)-2-hydroxy-acid oxidase-like [KO:K11517] [EC:1.1.3.15]
114297557  peroxisomal (S)-2-hydroxy-acid oxidase-like [KO:K11517] [EC:1.1.3.15]
114284245  catalase-like [KO:K03781] [EC:1.11.1.6]
114297862  catalase isozyme 1 [KO:K03781] [EC:1.11.1.6]
114278349  catalase isozyme 1-like isoform X1 [KO:K03781] [EC:1.11.1.6]
114314982  glyoxylate/hydroxypyruvate reductase HPR3-like isoform X1 [KO:K15919] [EC:1.1.1.79 1.1.1.81]
114270004  glyoxylate/hydroxypyruvate reductase HPR3-like isoform X1 [KO:K15919] [EC:1.1.1.79 1.1.1.81]
114270005  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
114270024  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
114314980  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
114317086  glyoxylate/succinic semialdehyde reductase 2, chloroplastic isoform X1 [KO:K18121] [EC:1.1.1.79 1.1.1.-]
114318799  glyoxylate/succinic semialdehyde reductase 1 isoform X1 [KO:K18121] [EC:1.1.1.79 1.1.1.-]
114301920  glyoxylate/succinic semialdehyde reductase 1-like [KO:K18121] [EC:1.1.1.79 1.1.1.-]
114296737  myosin light chain kinase A-like [KO:K18121] [EC:1.1.1.79 1.1.1.-]
114260301  glycerate dehydrogenase [KO:K15893] [EC:1.1.1.29]
114303396  phosphoglycolate phosphatase 2-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
114287101  phosphoglycolate phosphatase 1B, chloroplastic-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
114298761  phosphoglycolate phosphatase 2 [KO:K19269] [EC:3.1.3.18 3.1.3.48]
14412431  rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
114317534  ribulose bisphosphate carboxylase small chain, chloroplastic-like isoform X1 [KO:K01602] [EC:4.1.1.39]
114319844  ribulose bisphosphate carboxylase small chain, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
114320039  ribulose bisphosphate carboxylase small chain 1, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
114266904  ribulose bisphosphate carboxylase small chain, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
114268699  ribulose bisphosphate carboxylase small chain clone 512-like [KO:K01602] [EC:4.1.1.39]
114263857  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
114276960  serine--glyoxylate aminotransferase-like isoform X1 [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
114311865  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
114301050  glutamate--glyoxylate aminotransferase 2-like [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
114293314  ferredoxin-dependent glutamate synthase, chloroplastic [KO:K00284] [EC:1.4.7.1]
114323283  glutamine synthetase cytosolic isozyme 1 [KO:K01915] [EC:6.3.1.2]
114310255  glutamine synthetase nodule isozyme-like [KO:K01915] [EC:6.3.1.2]
114316917  glutamine synthetase leaf isozyme, chloroplastic [KO:K01915] [EC:6.3.1.2]
114305687  glutamine synthetase nodule isozyme-like [KO:K01915] [EC:6.3.1.2]
114264211  glutamine synthetase nodule isozyme-like [KO:K01915] [EC:6.3.1.2]
114266034  glutamine synthetase cytosolic isozyme 1-like [KO:K01915] [EC:6.3.1.2]
114271232  glutamine synthetase cytosolic isozyme 2-like [KO:K01915] [EC:6.3.1.2]
114323689  serine hydroxymethyltransferase 4-like [KO:K00600] [EC:2.1.2.1]
114310760  serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
114317956  uncharacterized protein LOC114317956 [KO:K00600] [EC:2.1.2.1]
114282526  serine hydroxymethyltransferase, mitochondrial-like isoform X1 [KO:K00600] [EC:2.1.2.1]
114268139  serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
114271572  serine hydroxymethyltransferase, mitochondrial isoform X1 [KO:K00600] [EC:2.1.2.1]
114273434  serine hydroxymethyltransferase 4-like [KO:K00600] [EC:2.1.2.1]
114274060  serine hydroxymethyltransferase 4 [KO:K00600] [EC:2.1.2.1]
114274647  serine hydroxymethyltransferase 7-like isoform X1 [KO:K00600] [EC:2.1.2.1]
114296457  serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
114277169  serine hydroxymethyltransferase, mitochondrial-like isoform X1 [KO:K00600] [EC:2.1.2.1]
114277173  serine hydroxymethyltransferase, mitochondrial-like [KO:K00600] [EC:2.1.2.1]
114257873  serine hydroxymethyltransferase 3, chloroplastic-like [KO:K00600] [EC:2.1.2.1]
114278493  serine hydroxymethyltransferase 3, chloroplastic-like [KO:K00600] [EC:2.1.2.1]
114322667  glycine dehydrogenase (decarboxylating), mitochondrial-like [KO:K00281] [EC:1.4.4.2]
114319217  glycine dehydrogenase (decarboxylating), mitochondrial-like [KO:K00281] [EC:1.4.4.2]
114294025  glycine dehydrogenase (decarboxylating), mitochondrial [KO:K00281] [EC:1.4.4.2]
114294074  aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
114291759  dihydrolipoyl dehydrogenase, mitochondrial [KO:K00382] [EC:1.8.1.4]
114277661  dihydrolipoyl dehydrogenase 2, chloroplastic-like isoform X1 [KO:K00382] [EC:1.8.1.4]
114258636  dihydrolipoyl dehydrogenase 2, chloroplastic-like isoform X1 [KO:K00382] [EC:1.8.1.4]
114308510  glycine cleavage system H protein, mitochondrial-like [KO:K02437]
114304350  glycine cleavage system H protein, mitochondrial-like [KO:K02437]
114265896  glycine cleavage system H protein 2, mitochondrial [KO:K02437]
114267952  glycine cleavage system H protein 2, mitochondrial-like [KO:K02437]
114271541  glycine cleavage system H protein 2, mitochondrial-like [KO:K02437]
114298477  glycine cleavage system H protein 3, mitochondrial-like [KO:K02437]
114308400  D-glycerate 3-kinase, chloroplastic-like [KO:K15918] [EC:2.7.1.31]
114302428  LOW QUALITY PROTEIN: D-glycerate 3-kinase, chloroplastic-like [KO:K15918] [EC:2.7.1.31]
114304659  uncharacterized protein LOC114304659 [KO:K15918] [EC:2.7.1.31]
114290271  formate dehydrogenase, mitochondrial [KO:K00122] [EC:1.17.1.9]
114313725  formyltetrahydrofolate deformylase 1, mitochondrial-like isoform X1 [KO:K01433] [EC:3.5.1.10]
114270740  formyltetrahydrofolate deformylase 1, mitochondrial-like isoform X1 [KO:K01433] [EC:3.5.1.10]
114318165  uncharacterized protein LOC114318165 isoform X1 [KO:K01455] [EC:3.5.1.49]
114296917  LOW QUALITY PROTEIN: oxalate--CoA ligase [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
csin00010  Glycolysis / Gluconeogenesis
csin00020  Citrate cycle (TCA cycle)
csin00030  Pentose phosphate pathway
csin00053  Ascorbate and aldarate metabolism
csin00071  Fatty acid degradation
csin00230  Purine metabolism
csin00250  Alanine, aspartate and glutamate metabolism
csin00260  Glycine, serine and threonine metabolism
csin00620  Pyruvate metabolism
csin00710  Carbon fixation by Calvin cycle
csin00750  Vitamin B6 metabolism
csin00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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