KEGG   PATHWAY: ctul04744
Entry
ctul04744                   Pathway                                
Name
Phototransduction - Cyprinodon tularosa (White Sands pupfish)
Description
Phototransduction is a biochemical process by which the photoreceptor cells generate electrical signals in response to captured photons. The vertebrate cascade starts with the absorption of photons by the photoreceptive pigments, the rhodopsins, which consist of a membrane embedded chromophore, 11-cis-retinal, and a G-protein-coupled receptor, opsin. The photon isomerizes 11-cis-retinal to all-trans-retinal which induces a structural change that activates the opsin. This triggers hydrolysis of cGMP by activating a transducinphosphodiesterase 6 (PDE6) cascade, which results in closure of the cGMP-gated cation channels (CNG) in the plasma membrane and membrane hyperpolarization. The hyperpolarization of the membrane potential of the photoreceptor cell modulates the release of neurotransmitters to downstream cells. Recovery from light involves the deactivation of the light- activated intermediates: photolyzed rhodopsin is phosphorylated by rhodopsin kinase (RK) and subsequently capped off by arrestin; GTP-binding transducin alpha subunit deactivates through a process that is stimulated by RGS9.
Class
Organismal Systems; Sensory system
Pathway map
ctul04744  Phototransduction
ctul04744

Other DBs
GO: 0009586
Organism
Cyprinodon tularosa (White Sands pupfish) [GN:ctul]
Gene
119784354  green-sensitive opsin-like [KO:K04250]
119784355  green-sensitive opsin-like [KO:K04250]
119784367  green-sensitive opsin [KO:K04250]
119774054  rhodopsin-like [KO:K04250]
119774104  rhodopsin [KO:K04250]
119782679  grk1a; rhodopsin kinase GRK1 [KO:K00909] [EC:2.7.11.14]
119777003  grk7a; rhodopsin kinase grk7a [KO:K00909] [EC:2.7.11.14]
119771834  grk7b; rhodopsin kinase grk7-b [KO:K00909] [EC:2.7.11.14]
119786381  rhodopsin kinase GRK1-like [KO:K00909] [EC:2.7.11.14]
119795115  recoverin-like [KO:K13764]
119783141  rcvrn2; recoverin 2 [KO:K13764]
119771961  rcvrna; recoverin a [KO:K13764]
119791582  S-arrestin-like [KO:K19627]
119773114  saga; S-arrestin a [KO:K19627]
119775081  gnat1; guanine nucleotide-binding protein G(t) subunit alpha-1 [KO:K04631]
119782255  gnat2; guanine nucleotide-binding protein G(t) subunit alpha-2 [KO:K04631]
119775091  gnb1b; guanine nucleotide binding protein (G protein), beta polypeptide 1b [KO:K04536]
119788593  gnb1a; guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 [KO:K04536]
119785843  gngt1; guanine nucleotide-binding protein G(T) subunit gamma-T1 [KO:K04548]
119771742  regulator of G-protein signaling 9-like isoform X1 [KO:K13765]
119778532  rgs9a; regulator of G-protein signaling 9a [KO:K13765]
119787339  pde6a; rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha [KO:K08718] [EC:3.1.4.35]
119782643  pde6b; rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta [KO:K13756] [EC:3.1.4.35]
119788469  retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like [KO:K13759]
119776026  pde6gb; phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog b [KO:K13759]
119778295  pde6ga; phosphodiesterase 6G, cGMP-specific, rod, gamma, paralog a [KO:K13759]
119780419  retinal guanylyl cyclase 2-like [KO:K12321] [EC:4.6.1.2]
119788608  gc2; retinal guanylyl cyclase 2 isoform X1 [KO:K12322] [EC:4.6.1.2]
119771782  gucy2f; retinal guanylyl cyclase 2 isoform X1 [KO:K12322] [EC:4.6.1.2]
119782035  guca1b; guanylyl cyclase-activating protein 2 [KO:K08328]
119788856  guanylyl cyclase-activating protein 2-like [KO:K08328]
119788859  guca1g; guanylate cyclase activator 1g [KO:K08328]
119789517  guca1c; guanylyl cyclase-activating protein 3 [KO:K08328]
119796328  guanylyl cyclase-activating protein 2-like [KO:K08328]
119791150  guca1a; guanylyl cyclase-activating protein 1 [KO:K08328]
119781162  guca1d; guanylate cyclase activator 1d [KO:K08328]
119772352  slc24a1; sodium/potassium/calcium exchanger 1 isoform X1 [KO:K13749]
119773321  sodium/potassium/calcium exchanger 1-like isoform X1 [KO:K13749]
119774694  calm1a; calmodulin-1a [KO:K02183]
119783499  calm1b; calmodulin-1b [KO:K02183]
119792107  calm3a; calmodulin 3a (phosphorylase kinase, delta) [KO:K02183]
119786449  calml4a; calmodulin-like protein 4a [KO:K02183]
119792734  calm2a; calmodulin 2a (phosphorylase kinase, delta) [KO:K02183]
119774663  cnga1b; cyclic nucleotide-gated channel rod photoreceptor subunit alpha [KO:K04948]
119777265  cnga1a; cyclic nucleotide gated channel subunit alpha 1a [KO:K04948]
119789158  cyclic nucleotide-gated cation channel beta-1-like [KO:K04952]
119796095  cngb1a; cyclic nucleotide-gated cation channel beta-3 isoform X1 [KO:K04952]
Compound
C00076  Calcium cation
C00144  GMP
C00238  Potassium cation
C00305  Magnesium cation
C00376  Retinal
C00942  3',5'-Cyclic GMP
C01330  Sodium cation
C02110  11-cis-Retinal
Reference
  Authors
Yau KW, Hardie RC
  Title
Phototransduction motifs and variations.
  Journal
Cell 139:246-64 (2009)
DOI:10.1016/j.cell.2009.09.029
Reference
  Authors
Koch KW, Duda T, Sharma RK
  Title
Photoreceptor specific guanylate cyclases in vertebrate phototransduction.
  Journal
Mol Cell Biochem 230:97-106 (2002)
Reference
PMID:9803480
  Authors
Jindrova H
  Title
Vertebrate phototransduction: activation, recovery, and adaptation.
  Journal
Physiol Res 47:155-68 (1998)
Reference
  Authors
Ebrey T, Koutalos Y
  Title
Vertebrate photoreceptors.
  Journal
Prog Retin Eye Res 20:49-94 (2001)
DOI:10.1016/S1350-9462(00)00014-8
Reference
  Authors
Pepe IM
  Title
Recent advances in our understanding of rhodopsin and phototransduction.
  Journal
Prog Retin Eye Res 20:733-59 (2001)
DOI:10.1016/S1350-9462(01)00013-1
Reference
  Authors
Kramer RH, Molokanova E
  Title
Modulation of cyclic-nucleotide-gated channels and regulation of vertebrate phototransduction.
  Journal
J Exp Biol 204:2921-31 (2001)
Reference
  Authors
Larhammar D, Nordstrom K, Larsson TA
  Title
Evolution of vertebrate rod and cone phototransduction genes.
  Journal
Philos Trans R Soc Lond B Biol Sci 364:2867-80 (2009)
DOI:10.1098/rstb.2009.0077
Reference
  Authors
Dizhoor AM, Olshevskaya EV, Peshenko IV
  Title
Mg2+/Ca2+ cation binding cycle of guanylyl cyclase activating proteins (GCAPs): role in regulation of photoreceptor guanylyl cyclase.
  Journal
Mol Cell Biochem 334:117-24 (2010)
DOI:10.1007/s11010-009-0328-6
Reference
  Authors
Krizaj D, Copenhagen DR
  Title
Calcium regulation in photoreceptors.
  Journal
Front Biosci 7:d2023-44 (2002)
Reference
PMID:9893707
  Authors
Shichida Y, Imai H
  Title
Visual pigment: G-protein-coupled receptor for light signals.
  Journal
Cell Mol Life Sci 54:1299-315 (1998)
DOI:10.1007/s000180050256
Reference
PMID:9419388
  Authors
Pugh EN Jr, Duda T, Sitaramayya A, Sharma RK
  Title
Photoreceptor guanylate cyclases: a review.
  Journal
Biosci Rep 17:429-73 (1997)
DOI:10.1023/A:1027365520442
Reference
  Authors
Luo DG, Xue T, Yau KW
  Title
How vision begins: an odyssey.
  Journal
Proc Natl Acad Sci U S A 105:9855-62 (2008)
DOI:10.1073/pnas.0708405105
Reference
  Authors
Peshenko IV, Dizhoor AM
  Title
Activation and inhibition of photoreceptor guanylyl cyclase by guanylyl cyclase activating protein 1 (GCAP-1): the functional role of Mg2+/Ca2+ exchange in EF-hand domains.
  Journal
J Biol Chem 282:21645-52 (2007)
DOI:10.1074/jbc.M702368200
Reference
  Authors
Ridge KD, Abdulaev NG, Sousa M, Palczewski K
  Title
Phototransduction: crystal clear.
  Journal
Trends Biochem Sci 28:479-87 (2003)
DOI:10.1016/S0968-0004(03)00172-5
Related
pathway
ctul00830  Retinol metabolism
KO pathway
ko04744   
LinkDB

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