KEGG   PATHWAY: cyq00630
Entry
cyq00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Cycloclasticus sp. P1
Class
Metabolism; Carbohydrate metabolism
Pathway map
cyq00630  Glyoxylate and dicarboxylate metabolism
cyq00630

Module
cyq_M00012  Glyoxylate cycle [PATH:cyq00630]
cyq_M00621  Glycine cleavage system [PATH:cyq00630]
Other DBs
GO: 0046487 0043648
Organism
Cycloclasticus sp. P1 [GN:cyq]
Gene
Q91_1166  icl; Isocitrate lyase family protein [KO:K01637] [EC:4.1.3.1]
Q91_0559  Acetyl-coenzyme A synthetase 2 [KO:K01895] [EC:6.2.1.1]
Q91_1167  aceB; Malate synthase A [KO:K01638] [EC:2.3.3.9]
Q91_1444  mdh; Malate dehydrogenase 1 [KO:K00024] [EC:1.1.1.37]
Q91_0050  citrate synthase I [KO:K01647] [EC:2.3.3.1]
Q91_1423  Citrate synthase-like protein [KO:K01647] [EC:2.3.3.1]
Q91_1187  Citrate synthase I [KO:K01647] [EC:2.3.3.1]
Q91_1092  Aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
Q91_1233  acetyl-coa acetyltransferase protein [KO:K00626] [EC:2.3.1.9]
Q91_0417  Acetyl-CoA acetyltransferase / 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
Q91_0558  phbB; Acetoacetyl-CoA reductase pro [KO:K00023] [EC:1.1.1.36]
Q91_1507  Acetoacetyl-CoA reductase pro [KO:K00023] [EC:1.1.1.36]
Q91_1346  maoC; hydratase, contains MaoC-like domain [KO:K17865] [EC:4.2.1.55]
Q91_1228  MaoC-like dehydratase [KO:K17865] [EC:4.2.1.55]
Q91_1188  Monoamine oxidase regulatory protein [KO:K17865] [EC:4.2.1.55]
Q91_1189  MaoC domain protein dehydratase [KO:K17865] [EC:4.2.1.55]
Q91_1992  Glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
Q91_2002  Phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
Q91_1178  Hydrolase, haloacid dehalogenase-like family [KO:K01091] [EC:3.1.3.18]
Q91_1512  Aminotransferase class V [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
Q91_0026  glnA; Glutamine synthetase, type I [KO:K01915] [EC:6.3.1.2]
Q91_1589  glyA; Serine hydroxymethyltransferase 2 [KO:K00600] [EC:2.1.2.1]
Q91_1954  glycine dehydrogenase subunit 1 [KO:K00282] [EC:1.4.4.2]
Q91_1952  Glycine dehydrogenase [KO:K00283] [EC:1.4.4.2]
Q91_1956  glycine cleavage system aminomethyltransferase T [KO:K00605] [EC:2.1.2.10]
Q91_1421  lpdA2; 2-oxoglutarate dehydrogenase, E3 component, lipoamide dehydrogen ase [KO:K00382] [EC:1.8.1.4]
Q91_1906  dihydrolipoamide dehydrogenase protein [KO:K00382] [EC:1.8.1.4]
Q91_1955  Glycine cleavage complex protein H [KO:K02437]
Q91_1441  Formate dehydrogenase alpha subunit [KO:K00123] [EC:1.17.1.9]
Q91_1440  Tungsten-containing formate dehydrogenase beta subunit [KO:K22515] [EC:1.17.1.9]
Q91_1891  Formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
cyq00010  Glycolysis / Gluconeogenesis
cyq00020  Citrate cycle (TCA cycle)
cyq00030  Pentose phosphate pathway
cyq00071  Fatty acid degradation
cyq00230  Purine metabolism
cyq00250  Alanine, aspartate and glutamate metabolism
cyq00260  Glycine, serine and threonine metabolism
cyq00620  Pyruvate metabolism
cyq00710  Carbon fixation by Calvin cycle
cyq00750  Vitamin B6 metabolism
cyq00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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