KEGG PATHWAY: dosa00790

PATHWAY: dosa00790

Entry

dosa00790                   Pathway

Name

Folate biosynthesis - Oryza sativa japonica (Japanese rice) (RAPDB)

Class

Metabolism; Metabolism of cofactors and vitamins

Pathway map

dosa00790

Folate biosynthesis

Other DBs

GO:

0046656

Organism

Oryza sativa japonica (Japanese rice) (RAPDB) [GN:dosa]

Gene

Os02t0592200-01

(RAP-DB) Os02g0592200; Similar to alkaline phosphatase D. [KO:K01113] [EC:3.1.3.1]

Os06t0154600-00

(RAP-DB) Os06g0154600; Similar to Dihydroneopterin aldolase. [KO:K01633] [EC:4.1.2.25 5.1.99.8 1.13.11.81]

Os08t0556200-01

(RAP-DB) Os08g0556200; Similar to Dihydroneopterin aldolase. [KO:K01633] [EC:4.1.2.25 5.1.99.8 1.13.11.81]

Os09t0560500-01

(RAP-DB) Os09g0560500; Dihydroneopterin aldolase family protein. [KO:K01633] [EC:4.1.2.25 5.1.99.8 1.13.11.81]

Os07t0618500-01

(RAP-DB) Os07g0618500; Similar to HPPK/DHPS. [KO:K13941] [EC:2.7.6.3 2.5.1.15]

Os11t0484400-01

(RAP-DB) Os11g0484400; Similar to bifunctional dihydrofolate reductase-thymidylate synthase. [KO:K13998] [EC:1.5.1.3 2.1.1.45]

Os12t0446900-01

(RAP-DB) Os12g0446900; Similar to bifunctional dihydrofolate reductase-thymidylate synthase. [KO:K13998] [EC:1.5.1.3 2.1.1.45]

Os03t0111100-01

(RAP-DB) Os03g0111100; Similar to Dihydrofolate synthetase /folylpolyglutamate synthetase. [KO:K01930] [EC:6.3.2.17]

Os10t0503200-01

(RAP-DB) Os10g0503200; Similar to Dihydrofolate synthetase /folylpolyglutamate synthetase. [KO:K01930] [EC:6.3.2.17]

Os05t0517500-01

(RAP-DB) Os05g0517500; Similar to Gamma-glutamyl hydrolase precursor (EC 3.4.19.9) (Gamma-Glu-X carboxypeptidase) (Conjugase) (GH). [KO:K01307] [EC:3.4.19.9]

Os05t0460600-01

(RAP-DB) Os05g0460600; Similar to GTP cyclohydrolase II/3,4-dihydroxy-2-butanone-4-phosphate synthase- like protein (Fragment). [KO:K14652] [EC:4.1.99.12 3.5.4.25]

Os02t0572400-01

(RAP-DB) Os02g0572400; Similar to Riboflavin biosynthesis protein ribA, chloroplast precursor [Includes: GTP cyclohydrolase II (EC 3.5.4.25); 3,4-dihydroxy-2-butanone 4- phosphate synthase (DHBP synthase)]. [KO:K14652] [EC:4.1.99.12 3.5.4.25]

Os08t0481950-01

(RAP-DB) Os08g0481950; Similar to predicted protein. [KO:K14652] [EC:4.1.99.12 3.5.4.25]

Os06t0699700-01

(RAP-DB) Os06g0699700; Similar to Aminodeoxychorismate synthase/glutamine amidotransferase. [KO:K13950] [EC:2.6.1.85]

Os01t0238500-01

(RAP-DB) Os01g0238500; Similar to Branched-chain-amino-acid aminotransferase-like protein 3, chloroplast precursor. [KO:K18482] [EC:4.1.3.38]

Os02t0273100-01

(RAP-DB) Os02g0273100; Aminotransferase, class IV family protein. [KO:K18482] [EC:4.1.3.38]

Os05t0244700-01

(RAP-DB) Os05g0244700; Aminotransferase, class IV family protein. [KO:K18482] [EC:4.1.3.38]

Os04t0496150-00

(RAP-DB) Os04g0496150; Similar to H0306B06.2 protein. [KO:K00079] [EC:1.1.1.184 1.1.1.189 1.1.1.197]

Os02t0607700-01

(RAP-DB) Os02g0607700; Short-chain dehydrogenase/reductase SDR domain containing protein. [KO:K00079] [EC:1.1.1.184 1.1.1.189 1.1.1.197]

Os01t0929500-01

(RAP-DB) Os01g0929500; Similar to predicted protein. [KO:K00079] [EC:1.1.1.184 1.1.1.189 1.1.1.197]

Os04t0496000-01

(RAP-DB) Os04g0496000; Glucose/ribitol dehydrogenase family protein. [KO:K00079] [EC:1.1.1.184 1.1.1.189 1.1.1.197]

Os02t0258900-01

(RAP-DB) Os02g0258900; Similar to Molybdopterin biosynthesis CNX2 protein (Molybdenum cofactor biosynthesis enzyme CNX2). [KO:K03639] [EC:4.1.99.22]

Os12t0507000-01

(RAP-DB) Os12g0507000; Similar to Molybdopterin biosynthesis CNX2 protein (Molybdenum cofactor biosynthesis enzyme CNX2). [KO:K03639] [EC:4.1.99.22]

Os04t0460500-00

(RAP-DB) Os04g0460500; Similar to H0219H12.9 protein. [KO:K03637] [EC:4.6.1.17]

Os02t0517366-00

(RAP-DB) Os02g0517366; Similar to Molybdenum cofactor synthesis protein 2B. [KO:K03635] [EC:2.8.1.12]

Os02t0140300-01

(RAP-DB) Os02g0140300; Molybdopterin biosynthesis MoaE family protein. [KO:K03635] [EC:2.8.1.12]

Os06t0670000-01

(RAP-DB) Os06g0670000; Similar to Molybdenum cofactor sulfurase. [KO:K15631] [EC:2.8.1.9]

Compound

C00044

GTP

C00101

Tetrahydrofolate

C00119

5-Phospho-alpha-D-ribose 1-diphosphate

C00156

4-Hydroxybenzoate

C00251

Chorismate

C00266

Glycolaldehyde

C00268

Dihydrobiopterin

C00272

Tetrahydrobiopterin

C00415

Dihydrofolate

C00504

Folate

C00568

4-Aminobenzoate

C00835

Sepiapterin

C00921

Dihydropteroate

C01217

5,6,7,8-Tetrahydromethanopterin

C01300

6-(Hydroxymethyl)-7,8-dihydropterin

C01304

2,5-Diamino-6-(5-phospho-D-ribosylamino)pyrimidin-4(3H)-one

C02587

Pyrimidodiazepine

C02953

7,8-Dihydrobiopterin

C03541

THF-polyglutamate

C03684

6-Pyruvoyltetrahydropterin

C04244

6-Lactoyl-5,6,7,8-tetrahydropterin

C04807

6-Hydroxymethyl-7,8-dihydropterin diphosphate

C04874

7,8-Dihydroneopterin

C04895

7,8-Dihydroneopterin 3'-triphosphate

C05922

Formamidopyrimidine nucleoside triphosphate

C05923

2,5-Diaminopyrimidine nucleoside triphosphate

C05924

Molybdopterin

C05925

Dihydroneopterin phosphate

C05926

Neopterin

C05927

7,8-Dihydromethanopterin

C06148

2,5-Diamino-6-(5'-triphosphoryl-3',4'-trihydroxy-2'-oxopentyl)-amino-4-oxopyrimidine

C06313

Biopterin

C09332

THF-L-glutamate

C11355

4-Amino-4-deoxychorismate

C15522

4a-Hydroxytetrahydrobiopterin

C15996

7-Cyano-7-carbaguanine

C16675

7-Aminomethyl-7-carbaguanine

C18237

Molybdoenzyme molybdenum cofactor

C18239

Precursor Z

C18802

Tetrahydrosarcinapterin

C19848

Adenylated molybdopterin

C19871

Guanylyl molybdenum cofactor

C20239

6-Carboxy-5,6,7,8-tetrahydropterin

C20248

7-Carboxy-7-carbaguanine

C20264

L-threo-Tetrahydrobiopterin

C20559

4-(beta-D-Ribofuranosyl)aniline 5'-phosphate

C20562

N-[(7,8-Dihydropterin-6-yl)methyl]-4-(beta-D-ribofuranosyl)aniline 5'-phosphate

C20566

7,8-Dihydroneopterin 2'-phosphate

C20567

7,8-Dihydroneopterin 2',3'-cyclic phosphate

C21007

5,6,7,8-Tetrahydromonapterin

C21008

7,8-Dihydromonapterin

C21065

7,8-Dihydroxanthopterin

C21094

7,8-Dihydromonapterin 3'-triphosphate

C21107

4-(beta-D-Ribofuranosyl)phenol 5'-phosphate

C21310

(8S)-3',8-Cyclo-7,8-dihydroguanosine 5'-triphosphate

C21485

Cytidylyl molybdenum cofactor

C21486

Thio-molybdenum cofactor

C21640

6-(1'-Hydroxy-2'-oxopropyl)-tetrahydropterin

Reference

Authors

Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).

Title

[Cellular Functions and Metabolic Maps] (In Japanese)

Journal

Tokyo Kagaku Dojin (1997)

Reference

PMID:19675644

Authors

Schwarz G, Mendel RR, Ribbe MW

Title

Molybdenum cofactors, enzymes and pathways.

Journal

Nature 460:839-47 (2009)
DOI:10.1038/nature08302

Reference

PMID:16632608

Authors

Hanzelmann P, Schindelin H

Title

Binding of 5'-GTP to the C-terminal FeS cluster of the radical S-adenosylmethionine enzyme MoaA provides insights into its mechanism.

Journal

Proc Natl Acad Sci U S A 103:6829-34 (2006)
DOI:10.1073/pnas.0510711103

Reference

PMID:18092812

Authors

Daniels JN, Wuebbens MM, Rajagopalan KV, Schindelin H

Title

Crystal structure of a molybdopterin synthase-precursor Z complex: insight into its sulfur transfer mechanism and its role in molybdenum cofactor deficiency.

Journal

Biochemistry 47:615-26 (2008)
DOI:10.1021/bi701734g

Reference

PMID:12571226

Authors

Wuebbens MM, Rajagopalan KV

Title

Mechanistic and mutational studies of Escherichia coli molybdopterin synthase clarify the final step of molybdopterin biosynthesis.

Journal

J Biol Chem 278:14523-32 (2003)
DOI:10.1074/jbc.M300453200

Reference

PMID:21867484