KEGG   PATHWAY: dso02020
Entry
dso02020                    Pathway                                
Name
Two-component system - Dickeya solani IPO 2222
Description
Two-component signal transduction systems enable bacteria to sense, respond, and adapt to changes in their environment or in their intracellular state. Each two-component system consists of a sensor protein-histidine kinase (HK) and a response regulator (RR). In the prototypical two-component pathway, the sensor HK phosphorylates its own conserved His residue in response to a signal(s) in the environment. Subsequently, the phosphoryl group of HK is transferred onto a specific Asp residue on the RR. The activated RR can then effect changes in cellular physiology, often by regulating gene expression. Two-component pathways thus often enable cells to sense and respond to stimuli by inducing changes in transcription.
Class
Environmental Information Processing; Signal transduction
Pathway map
dso02020  Two-component system
dso02020

Other DBs
GO: 0000160
Organism
Dickeya solani IPO 2222 [GN:dso]
Gene
A4U42_14330  phoR; two-component system sensor histidine kinase PhoR [KO:K07636] [EC:2.7.13.3]
A4U42_14325  DNA-binding response regulator [KO:K07657]
A4U42_07945  alkaline phosphatase [KO:K01077] [EC:3.1.3.1]
A4U42_08960  phosphate ABC transporter substrate-binding protein [KO:K02040]
A4U42_14335  phosphate ABC transporter substrate-binding protein [KO:K02040]
A4U42_20480  sensor protein PhoQ [KO:K07637] [EC:2.7.13.3]
A4U42_20475  DNA-binding response regulator [KO:K07660]
A4U42_07200  envZ; two-component system sensor histidine kinase EnvZ [KO:K07638] [EC:2.7.13.3]
A4U42_07205  ompR; two-component system response regulator OmpR [KO:K07659]
A4U42_00765  porin [KO:K09476]
A4U42_00770  porin [KO:K09476]
A4U42_00775  porin [KO:K09476]
A4U42_08020  cpxA; two-component system sensor histidine kinase CpxA [KO:K07640] [EC:2.7.13.3]
A4U42_08015  DNA-binding response regulator [KO:K07662]
A4U42_12000  modulator protein [KO:K25864]
A4U42_00160  two-component sensor histidine kinase [KO:K07639] [EC:2.7.13.3]
A4U42_00155  two-component system response regulator RstA [KO:K07661]
A4U42_03495  serine endoprotease [KO:K04771] [EC:3.4.21.107]
A4U42_02895  two-component system sensor histidine kinase BaeA [KO:K07642] [EC:2.7.13.3]
A4U42_02900  DNA-binding response regulator [KO:K07664]
A4U42_02875  multidrug transporter subunit MdtA [KO:K07799]
A4U42_02880  multidrug transporter subunit MdtC [KO:K07788]
A4U42_02885  multidrug transporter subunit MdtC [KO:K07789]
A4U42_02890  multidrug transporter subunit MdtD [KO:K18326]
A4U42_06910  two-component sensor histidine kinase [KO:K07643] [EC:2.7.13.3]
A4U42_06905  DNA-binding response regulator [KO:K07771]
A4U42_09025  UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [KO:K07806] [EC:2.6.1.87]
A4U42_12585  two-component sensor histidine kinase [KO:K07644] [EC:2.7.13.3]
A4U42_10315  two-component sensor histidine kinase [KO:K07644] [EC:2.7.13.3]
A4U42_12580  DNA-binding response regulator [KO:K07665]
A4U42_10310  DNA-binding response regulator [KO:K07665]
A4U42_15490  cobalt transporter [KO:K07810]
A4U42_15480  efflux transporter periplasmic adaptor subunit [KO:K07798]
A4U42_15475  cation transporter [KO:K07787]
A4U42_01430  flagellar transcriptional activator FlhD [KO:K02403]
A4U42_01425  transcriptional regulator FlhC [KO:K02402]
A4U42_01205  flagellin [KO:K02406]
A4U42_01170  fliA; RNA polymerase sigma factor FliA [KO:K02405]
A4U42_01420  flagellar motor stator protein MotA [KO:K02556]
A4U42_15260  two-component system sensor histidine kinase KdbD [KO:K07646] [EC:2.7.13.3]
A4U42_15255  DNA-binding response regulator [KO:K07667]
A4U42_15275  potassium-transporting ATPase subunit KdpA [KO:K01546]
A4U42_15270  potassium-transporting ATPase subunit B [KO:K01547] [EC:7.2.2.6]
A4U42_15265  potassium-transporting ATPase subunit C [KO:K01548]
A4U42_15280  ATPase [KO:K01545]
A4U42_10790  aerobic respiration two-component sensor histidine kinase ArcB [KO:K07648] [EC:2.7.13.3]
A4U42_05880  DNA-binding response regulator [KO:K07773]
A4U42_09115  dnaA; chromosomal replication initiation protein DnaA [KO:K02313]
A4U42_04070  D-alanine--poly(phosphoribitol) ligase [KO:K03367] [EC:6.1.1.13]
A4U42_09640  alanine-phosphoribitol ligase [KO:K03367] [EC:6.1.1.13]
A4U42_09635  alanine-phosphoribitol ligase [KO:K03367] [EC:6.1.1.13]
A4U42_04075  membrane-bound O-acyltransferase [KO:K03739]
A4U42_04065  hypothetical protein [KO:K14188] [EC:6.1.1.13]
A4U42_04080  DltD [KO:K03740]
A4U42_05355  outer membrane receptor protein [KO:K19611]
A4U42_18700  histidine kinase [KO:K07700] [EC:2.7.13.3]
A4U42_02625  histidine kinase [KO:K07700] [EC:2.7.13.3]
A4U42_18695  dpiA; two-component response regulator DpiA [KO:K07702]
A4U42_18715  [citrate (pro-3S)-lyase] ligase [KO:K01910] [EC:6.2.1.22]
A4U42_18720  citrate lyase ACP [KO:K01646]
A4U42_18725  citrate lyase subunit beta [KO:K01644] [EC:4.1.3.34]
A4U42_18730  citrate lyase subunit alpha [KO:K01643] [EC:2.8.3.10]
A4U42_18735  apo-citrate lyase phosphoribosyl-dephospho-CoA transferase [KO:K05964] [EC:2.7.7.61]
A4U42_18740  triphosphoribosyl-dephospho-CoA synthase [KO:K05966] [EC:2.4.2.52]
A4U42_08345  two-component system sensor histidine kinase DcuS [KO:K07701] [EC:2.7.13.3]
A4U42_08340  transcriptional regulator [KO:K07703]
A4U42_16655  anaerobic C4-dicarboxylate transporter [KO:K07792]
A4U42_17570  NAD-dependent malic enzyme [KO:K00027] [EC:1.1.1.38]
A4U42_08160  malate permease [KO:K11616]
A4U42_08335  malate permease [KO:K11616]
A4U42_20925  two-component system sensor histidine kinase NarX [KO:K07673] [EC:2.7.13.3]
A4U42_20930  DNA-binding response regulator [KO:K07684]
A4U42_20905  narZ; nitrate reductase subunit alpha [KO:K00370] [EC:1.7.5.1 1.7.99.-]
A4U42_20900  narH; nitrate reductase subunit beta [KO:K00371] [EC:1.7.5.1 1.7.99.-]
A4U42_20890  narI; respiratory nitrate reductase subunit gamma [KO:K00374] [EC:1.7.5.1 1.7.99.-]
A4U42_20895  nitrate reductase [KO:K00373]
A4U42_16865  formate dehydrogenase [KO:K08348] [EC:1.17.5.3]
A4U42_01755  formate dehydrogenase [KO:K08348] [EC:1.17.5.3]
A4U42_16875  formate dehydrogenase [KO:K08350]
A4U42_06515  fumarate reductase (quinol) flavoprotein subunit [KO:K00244] [EC:1.3.5.1]
A4U42_06520  fumarate reductase [KO:K00245] [EC:1.3.5.1]
A4U42_06525  fumarate reductase subunit C [KO:K00246]
A4U42_06530  fumarate reductase [KO:K00247]
A4U42_12070  transcriptional regulator [KO:K07783]
A4U42_12065  two-component system sensor histidine kinase UhpB [KO:K07675] [EC:2.7.13.3]
A4U42_12060  DNA-binding response regulator [KO:K07686]
A4U42_12075  uhpT; antiporter [KO:K07784]
A4U42_04425  hypothetical protein [KO:K06080]
A4U42_14790  two-component system sensor histidine kinase/response regulator [KO:K07677] [EC:2.7.13.3]
A4U42_14800  tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase [KO:K07676] [EC:2.7.13.3]
A4U42_14795  DNA-binding response regulator [KO:K07687]
A4U42_04575  two-component system sensor histidine kinase BarA [KO:K07678] [EC:2.7.13.3]
A4U42_01595  sirA; two-component system response regulator UvrY [KO:K07689]
A4U42_15830  LuxR family transcriptional regulator [KO:K07782]
A4U42_03860  carbon storage regulator [KO:K03563]
A4U42_13950  [protein-PII] uridylyltransferase [KO:K00990] [EC:2.7.7.59]
A4U42_03270  transcriptional regulator [KO:K04751]
A4U42_08660  glnL; PAS domain-containing sensor histidine kinase [KO:K07708] [EC:2.7.13.3]
A4U42_08665  glnG; nitrogen regulation protein NR(I) [KO:K07712]
A4U42_08655  glnA; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
A4U42_06255  nif-specific transcriptional activator NifA [KO:K02584]
A4U42_08235  C4-dicarboxylate transporter [KO:K11103]
A4U42_10650  RNA polymerase factor sigma-54 [KO:K03092]
A4U42_03285  two-component sensor histidine kinase [KO:K07711] [EC:2.7.13.3]
A4U42_03275  response regulator GlrR [KO:K07715]
A4U42_01830  hydrogenase 2 small subunit [KO:K06282] [EC:1.12.99.6]
A4U42_01815  hydrogenase 2 large subunit [KO:K06281] [EC:1.12.99.6]
A4U42_01395  chemotaxis protein CheR [KO:K00575] [EC:2.1.1.80]
A4U42_01635  chemotaxis protein [KO:K03406]
A4U42_04815  chemotaxis protein [KO:K03406]
A4U42_05100  chemotaxis protein [KO:K03406]
A4U42_08090  chemotaxis protein [KO:K03406]
A4U42_08095  chemotaxis protein [KO:K03406]
A4U42_01100  chemotaxis protein [KO:K03406]
A4U42_08435  chemotaxis protein [KO:K03406]
A4U42_18280  chemotaxis protein [KO:K03406]
A4U42_18285  chemotaxis protein [KO:K03406]
A4U42_18290  chemotaxis protein [KO:K03406]
A4U42_18295  chemotaxis protein [KO:K03406]
A4U42_18300  chemotaxis protein [KO:K03406]
A4U42_11450  chemotaxis protein [KO:K03406]
A4U42_06240  chemotaxis protein [KO:K03406]
A4U42_14300  chemotaxis protein [KO:K03406]
A4U42_14725  chemotaxis protein [KO:K03406]
A4U42_15225  chemotaxis protein [KO:K03406]
A4U42_19345  chemotaxis protein [KO:K05874]
A4U42_01400  methyl-accepting chemotaxis protein II [KO:K05874]
A4U42_00085  methyl-accepting chemotaxis protein II [KO:K05874]
A4U42_11110  chemotaxis protein [KO:K05874]
A4U42_06330  chemotaxis protein [KO:K05874]
A4U42_04685  chemotaxis protein [KO:K05874]
A4U42_04845  chemotaxis protein [KO:K05874]
A4U42_20980  chemotaxis protein [KO:K05875]
A4U42_20715  chemotaxis protein [KO:K05875]
A4U42_20720  chemotaxis protein [KO:K05875]
A4U42_09440  chemotaxis protein [KO:K05875]
A4U42_00230  chemotaxis protein [KO:K05875]
A4U42_04770  hypothetical protein [KO:K05875]
A4U42_18690  hypothetical protein [KO:K05875]
A4U42_19845  hypothetical protein [KO:K05875]
A4U42_11620  chemotaxis protein [KO:K05876]
A4U42_05920  chemotaxis protein [KO:K05876]
A4U42_01440  chemotaxis protein [KO:K05876]
A4U42_00090  aerotaxis receptor Aer [KO:K03776]
A4U42_04615  chemotaxis protein [KO:K03776]
A4U42_01405  chemotaxis protein CheW [KO:K03408]
A4U42_01410  chemotaxis protein CheA [KO:K03407] [EC:2.7.13.3]
A4U42_01385  two-component system response regulator [KO:K03413]
A4U42_01390  chemotaxis response regulator protein-glutamate methylesterase [KO:K03412] [EC:3.1.1.61 3.5.1.44]
A4U42_17115  chemotaxis protein CheV [KO:K03415]
A4U42_15100  artP; arginine transporter ATP-binding subunit [KO:K10004] [EC:7.4.2.1]
A4U42_15105  amino acid ABC transporter permease [KO:K10002]
A4U42_15110  amino acid ABC transporter permease [KO:K10003]
A4U42_15115  amino acid transporter [KO:K10001]
A4U42_07030  transcriptional regulator Crp [KO:K10914]
A4U42_17640  cytochrome D ubiquinol oxidase subunit I [KO:K00425] [EC:7.1.1.7]
A4U42_15370  cytochrome d terminal oxidase subunit 1 [KO:K00425] [EC:7.1.1.7]
A4U42_17645  ubiquinol oxidase subunit II [KO:K00426] [EC:7.1.1.7]
A4U42_15375  cytochrome d ubiquinol oxidase subunit 2 [KO:K00426] [EC:7.1.1.7]
A4U42_15380  cyd operon protein YbgT [KO:K00424] [EC:7.1.1.7]
A4U42_10860  outer membrane channel protein TolC [KO:K12340]
A4U42_13630  hypothetical protein [KO:K12340]
A4U42_15610  polysaccharide export protein Wza [KO:K01991]
A4U42_15615  protein tyrosine phosphatase [KO:K25307] [EC:3.1.3.48]
A4U42_15620  tyrosine protein kinase [KO:K16692] [EC:2.7.10.3]
A4U42_07625  UDP-N-acetyl glucosamine 2-epimerase [KO:K01791] [EC:5.1.3.14]
A4U42_07620  wecC; UDP-N-acetyl-D-mannosamine dehydrogenase [KO:K02472] [EC:1.1.1.336]
A4U42_03265  pectinesterase A [KO:K01051] [EC:3.1.1.11]
A4U42_17960  acyl-CoA thioesterase [KO:K01051] [EC:3.1.1.11]
A4U42_01465  endoglucanase [KO:K01179] [EC:3.2.1.4]
A4U42_12725  RNA polymerase subunit sigma [KO:K23514]
A4U42_12730  hypothetical protein [KO:K07165]
A4U42_01355  flagellar biosynthesis anti-sigma factor FlgM [KO:K02398]
Compound
C00007  Oxygen
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00034  Manganese
C00036  Oxaloacetate
C00038  Zinc cation
C00042  Succinate
C00049  L-Aspartate
C00064  L-Glutamine
C00070  Copper
C00088  Nitrite
C00092  D-Glucose 6-phosphate
C00122  Fumarate
C00149  (S)-Malate
C00158  Citrate
C00164  Acetoacetate
C00237  CO
C00238  Potassium cation
C00244  Nitrate
C00282  Hydrogen
C00291  Nickel
C00305  Magnesium cation
C00399  Ubiquinone
C00533  Nitric oxide
C00547  L-Noradrenaline
C00697  Nitrogen
C00788  L-Adrenaline
C00828  Menaquinone
C01019  L-Fucose
C01104  Trimethylamine N-oxide
C01667  Bacitracin
C02084  Tetrathionate
C05757  (3R)-3-Hydroxydodecanoyl-[acyl-carrier protein]
C05818  2-Demethylmenaquinone
C06230  Fe-enterobactin
C06689  Vancomycin
C06696  Lead
C11612  Polymyxin B
C11842  N-(3-(S)-Hydroxybutyryl)homoserine lactone
C11849  3-Hydroxy-palmitic acid methyl ester
C12008  Ramoplanin A2
C13768  Colistin sulfate
C14819  Fe3+
C16421  AI-2
C16463  3',5'-Cyclic diGMP
C16640  CAI-1
C16665  12-Methyltetradecanoic acid
C18206  cis-11-Methyl-2-dodecenoic acid
C21220  AIP-1
C21221  CSP
C21241  AIP-2
C21242  AIP-3
C21243  AIP-4
C21245  AgrD1 peptide
D07746  Colistin (INN)
D08401  Polymyxin B (INN)
Reference
  Authors
Yamamoto K, Hirao K, Oshima T, Aiba H, Utsumi R, Ishihama A.
  Title
Functional characterization in vitro of all two-component signal transduction systems from Escherichia coli.
  Journal
J Biol Chem 280:1448-56 (2005)
DOI:10.1074/jbc.M410104200
Reference
  Authors
Abdel-Fattah WR, Chen Y, Eldakak A, Hulett FM.
  Title
Bacillus subtilis phosphorylated PhoP: direct activation of the E(sigma)A- and repression of the E(sigma)E-responsive phoB-PS+V promoters during pho response.
  Journal
J Bacteriol 187:5166-78 (2005)
DOI:10.1128/JB.187.15.5166-5178.2005
Reference
  Authors
Navarre WW, Halsey TA, Walthers D, Frye J, McClelland M, Potter JL, Kenney LJ, Gunn JS, Fang FC, Libby SJ.
  Title
Co-regulation of Salmonella enterica genes required for virulence and resistance to antimicrobial peptides by SlyA and PhoP/PhoQ.
  Journal
Mol Microbiol 56:492-508 (2005)
DOI:10.1111/j.1365-2958.2005.04553.x
Reference
  Authors
Cai SJ, Inouye M.
  Title
EnvZ-OmpR interaction and osmoregulation in Escherichia coli.
  Journal
J Biol Chem 277:24155-61 (2002)
DOI:10.1074/jbc.M110715200
Reference
  Authors
Batchelor E, Walthers D, Kenney LJ, Goulian M.
  Title
The Escherichia coli CpxA-CpxR envelope stress response system regulates expression of the porins ompF and ompC.
  Journal
J Bacteriol 187:5723-31 (2005)
DOI:10.1128/JB.187.16.5723-5731.2005
Reference
  Authors
Nagakubo S, Nishino K, Hirata T, Yamaguchi A.
  Title
The putative response regulator BaeR stimulates multidrug resistance of Escherichia coli via a novel multidrug exporter system, MdtABC.
  Journal
J Bacteriol 184:4161-7 (2002)
DOI:10.1128/JB.184.15.4161-4167.2002
Reference
  Authors
Hagiwara D, Yamashino T, Mizuno T.
  Title
A Genome-wide view of the Escherichia coli BasS-BasR two-component system implicated in iron-responses.
  Journal
Biosci Biotechnol Biochem 68:1758-67 (2004)
DOI:10.1271/bbb.68.1758
Reference
  Authors
Munson GP, Lam DL, Outten FW, O'Halloran TV.
  Title
Identification of a copper-responsive two-component system on the chromosome of Escherichia coli K-12.
  Journal
J Bacteriol 182:5864-71 (2000)
DOI:10.1128/JB.182.20.5864-5871.2000
Reference
  Authors
Sperandio V, Torres AG, Kaper JB.
  Title
Quorum sensing Escherichia coli regulators B and C (QseBC): a novel two-component regulatory system involved in the regulation of flagella and motility by quorum sensing in E. coli.
  Journal
Mol Microbiol 43:809-21 (2002)
DOI:10.1046/j.1365-2958.2002.02803.x
Reference
  Authors
Epstein W.
  Title
The roles and regulation of potassium in bacteria.
  Journal
Prog Nucleic Acid Res Mol Biol 75:293-320 (2003)
DOI:10.1016/S0079-6603(03)75008-9
Reference
  Authors
Ansaldi M, Simon G, Lepelletier M, Mejean V.
  Title
The TorR high-affinity binding site plays a key role in both torR autoregulation and torCAD operon expression in Escherichia coli.
  Journal
J Bacteriol 182:961-6 (2000)
DOI:10.1128/JB.182.4.961-966.2000
Reference
  Authors
Malpica R, Franco B, Rodriguez C, Kwon O, Georgellis D.
  Title
Identification of a quinone-sensitive redox switch in the ArcB sensor kinase.
  Journal
Proc Natl Acad Sci U S A 101:13318-23 (2004)
DOI:10.1073/pnas.0403064101
Reference
PMID:2666399
  Authors
Widenhorn KA, Somers JM, Kay WW.
  Title
Genetic regulation of the tricarboxylate transport operon (tctI) of Salmonella typhimurium.
  Journal
J Bacteriol 171:4436-41 (1989)
DOI:10.1128/JB.171.8.4436-4441.1989
Reference
  Authors
Hyyrylainen HL, Bolhuis A, Darmon E, Muukkonen L, Koski P, Vitikainen M, Sarvas M, Pragai Z, Bron S, van Dijl JM, Kontinen VP.
  Title
A novel two-component regulatory system in Bacillus subtilis for the survival of severe secretion stress.
  Journal
Mol Microbiol 41:1159-72 (2001)
DOI:10.1046/j.1365-2958.2001.02576.x
Reference
  Authors
Zhang X, Hulett FM.
  Title
ResD signal transduction regulator of aerobic respiration in Bacillus subtilis: ctaA promoter regulation.
  Journal
Mol Microbiol 37:1208-19 (2000)
DOI:10.1046/j.1365-2958.2000.02076.x
Reference
  Authors
Senadheera MD, Guggenheim B, Spatafora GA, Huang YC, Choi J, Hung DC, Treglown JS, Goodman SD, Ellen RP, Cvitkovitch DG.
  Title
A VicRK signal transduction system in Streptococcus mutans affects gtfBCD, gbpB, and ftf expression, biofilm formation, and genetic competence development.
  Journal
J Bacteriol 187:4064-76 (2005)
DOI:10.1128/JB.187.12.4064-4076.2005
Reference
  Authors
He H, Zahrt TC.
  Title
Identification and characterization of a regulatory sequence recognized by Mycobacterium tuberculosis persistence regulator MprA.
  Journal
J Bacteriol 187:202-12 (2005)
DOI:10.1128/JB.187.1.202-212.2005
Reference
  Authors
Hutchings MI
  Title
Unusual two-component signal transduction pathways in the actinobacteria.
  Journal
Adv Appl Microbiol 61:1-26 (2007)
DOI:10.1016/S0065-2164(06)61001-0
Reference
  Authors
Kramer R
  Title
Osmosensing and osmosignaling in Corynebacterium glutamicum.
  Journal
Amino Acids 37:487-97 (2009)
DOI:10.1007/s00726-009-0271-6
Reference
PMID:7751278
  Authors
Eraso JM, Kaplan S.
  Title
Oxygen-insensitive synthesis of the photosynthetic membranes of Rhodobacter sphaeroides: a mutant histidine kinase.
  Journal
J Bacteriol 177:2695-706 (1995)
DOI:10.1128/JB.177.10.2695-2706.1995
Reference
  Authors
Haydel SE, Dunlap NE, Benjamin WH Jr.
  Title
In vitro evidence of two-component system phosphorylation between the Mycobacterium tuberculosis TrcR/TrcS proteins.
  Journal
Microb Pathog 26:195-206 (1999)
DOI:10.1006/mpat.1998.0265
Reference
  Authors
Quisel JD, Burkholder WF, Grossman AD.
  Title
In vivo effects of sporulation kinases on mutant Spo0A proteins in Bacillus subtilis.
  Journal
J Bacteriol 183:6573-8 (2001)
DOI:10.1128/JB.183.22.6573-6578.2001
Reference
  Authors
Kaspar S, Bott M.
  Title
The sensor kinase CitA (DpiB) of Escherichia coli functions as a high-affinity citrate receptor.
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Related
pathway
dso00190  Oxidative phosphorylation
dso00550  Peptidoglycan biosynthesis
dso00910  Nitrogen metabolism
dso02030  Bacterial chemotaxis
dso02040  Flagellar assembly
dso03070  Bacterial secretion system
KO pathway
ko02020   
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