KEGG   PATHWAY: dtl00630
Entry
dtl00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Dyella telluris
Class
Metabolism; Carbohydrate metabolism
Pathway map
dtl00630  Glyoxylate and dicarboxylate metabolism
dtl00630

Module
dtl_M00012  Glyoxylate cycle [PATH:dtl00630]
dtl_M00621  Glycine cleavage system [PATH:dtl00630]
Other DBs
GO: 0046487 0043648
Organism
Dyella telluris [GN:dtl]
Gene
H8F01_09090  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
H8F01_10060  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
H8F01_09085  malate synthase A [KO:K01638] [EC:2.3.3.9]
H8F01_02250  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
H8F01_12710  citrate synthase [KO:K01647] [EC:2.3.3.1]
H8F01_18480  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
H8F01_18485  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
H8F01_10475  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
H8F01_16310  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
H8F01_19185  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
H8F01_17265  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
H8F01_04140  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
H8F01_12520  (Fe-S)-binding protein [KO:K11473] [EC:1.1.99.14]
H8F01_01370  catalase family peroxidase [KO:K03781] [EC:1.11.1.6]
H8F01_01715  D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
H8F01_19470  HAD hydrolase-like protein [KO:K01091] [EC:3.1.3.18]
H8F01_06405  HAD hydrolase-like protein [KO:K01091] [EC:3.1.3.18]
H8F01_10285  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
H8F01_05825  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
H8F01_02060  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
H8F01_06195  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
H8F01_12285  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
H8F01_17745  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
H8F01_06190  gcvH; glycine cleavage system protein GcvH [KO:K02437]
H8F01_20935  TIM barrel protein [KO:K01816] [EC:5.3.1.22]
H8F01_05575  kinase [KO:K15918] [EC:2.7.1.31]
H8F01_09650  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
H8F01_16630  fdnG; formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
H8F01_16635  fdxH; formate dehydrogenase subunit beta [KO:K00124]
H8F01_16640  formate dehydrogenase subunit gamma [KO:K00127]
H8F01_15890  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
H8F01_15790  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
dtl00010  Glycolysis / Gluconeogenesis
dtl00020  Citrate cycle (TCA cycle)
dtl00030  Pentose phosphate pathway
dtl00053  Ascorbate and aldarate metabolism
dtl00071  Fatty acid degradation
dtl00230  Purine metabolism
dtl00250  Alanine, aspartate and glutamate metabolism
dtl00260  Glycine, serine and threonine metabolism
dtl00620  Pyruvate metabolism
dtl00710  Carbon fixation by Calvin cycle
dtl00750  Vitamin B6 metabolism
dtl00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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