Entry
Name
ABC transporters - Escherichia coli KO11FL
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
BRITE hierarchy
Pathway map
Ortholog table
Other DBs
Organism
Escherichia coli KO11FL [GN:
ekf ]
Gene
KO11_18045 ssuA; alkanesulfonate transporter substrate-binding subunit [KO:K15553 ]
KO11_19980 modF; putative molybdenum transport ATP-binding protein ModF [KO:K05776 ]
KO11_17105 potD; spermidine/putrescine ABC transporter periplasmic substrate-binding protein [KO:K11069 ]
KO11_17100 potC; spermidine/putrescine ABC transporter membrane protein [KO:K11070 ]
KO11_17095 potB; spermidine/putrescine ABC transporter membrane protein [KO:K11071 ]
KO11_19245 potF; putrescine transporter subunit: periplasmic-binding component of ABC superfamily [KO:K11073 ]
KO11_19230 potI; putrescine transporter subunit: membrane component of ABC superfamily [KO:K11074 ]
KO11_19235 potH; putrescine transporter subunit: membrane component of ABC superfamily [KO:K11075 ]
KO11_11970 osmF; putative transporter subunit: periplasmic-binding component of ABC superfamily protein [KO:K05845 ]
KO11_11975 yehY; putative transporter subunit: permease component of ABC superfamily protein [KO:K05846 ]
KO11_11985 yehW; ABC transporter quaternary amine uptake (QAT) family, permease protein [KO:K05846 ]
KO11_11980 yehX; putative transporter subunit: ATP-binding component of ABC superfamily transporter [KO:K05847 ] [EC:7.6.2.9 ]
KO11_02190 malK; maltose/maltodextrin transporter ATP-binding protein [KO:K10111 ] [EC:7.5.2.-]
KO11_10080 yphF; putative sugar transporter subunit: periplasmic-binding component of ABC superfamily protein [KO:K23545 ]
KO11_10085 yphE; fused putative sugar transporter subunits of ABC superfamily: ATP-binding components [KO:K23547 ]
KO11_06700 yrbE; toluene transporter subunit: membrane component of ABC superfamily [KO:K02066 ]
KO11_13205 araF; L-arabinose ABC transporter substrate binding component [KO:K10537 ]
KO11_22790 yjfF; inner membrane ABC transporter permease protein YjfF [KO:K23509 ]
KO11_11880 mglB; methyl-galactoside ABC transporter galactose-binding periplasmic protein MglB [KO:K10540 ]
KO11_11890 mglC; beta-methylgalactoside transporter inner membrane component [KO:K10541 ]
KO11_05515 ugpB; glycerol-3-phosphate transporter periplasmic binding protein [KO:K05813 ]
KO11_03685 pstS; phosphate ABC transporter periplasmic substrate-binding protein PstS [KO:K02040 ]
KO11_01810 phnD; phosphonate/organophosphate ester transporter subunit PhnD [KO:K02044 ]
KO11_01815 phnE; membrane channel protein component of Pn transporter [KO:K02042 ]
KO11_11145 argT; ABC transporter lysine/arginine/ornithine binding periplasmic protein [KO:K10013 ]
KO11_11160 hisM; histidine/lysine/arginine/ornithine ABC transporter permease HisM [KO:K10015 ]
KO11_11155 hisQ; histidine/lysine/arginine/ornithine ABC transporter permease HisQ [KO:K10016 ]
KO11_11150 hisJ; histidine ABC transporter substrate-binding protein HisJ [KO:K10014 ]
KO11_06360 yhdW; putative amino-acid ABC transporter-binding protein yhdW precursor [KO:K09969 ]
KO11_05470 livJ; leucine ABC transporter subunit substrate-binding protein LivK [KO:K01999 ]
KO11_05490 livK; leucine ABC transporter subunit substrate-binding protein LivK [KO:K01999 ]
KO11_05495 livH; branched-chain amino acid transporter permease subunit LivH [KO:K01997 ]
KO11_05500 livM; leucine/isoleucine/valine transporter permease subunit [KO:K01998 ]
KO11_05505 livG; leucine/isoleucine/valine transporter ATP-binding subunit [KO:K01995 ]
KO11_05510 livF; leucine/isoleucine/valine transporter ATP-binding subunit [KO:K01996 ]
KO11_00960 metQ; DL-methionine transporter substrate-binding subunit [KO:K02073 ]
KO11_16610 oppA; oligopeptide ABC transporter substrate-binding protein OppA [KO:K15580 ]
KO11_16150 mppA; murein tripeptide (L-ala-gamma-D-glutamyl-meso-DAP) transporter subunit [KO:K15580 ]
KO11_16590 oppF; oligopeptide ABC transporter ATP-binding protein OppF [KO:K10823 ]
KO11_16340 sapA; antimicrobial peptide ABC transporter periplasmic binding protein SapA [KO:K19226 ]
KO11_16345 sapB; antimicrobial peptide ABC transporter permease SapB [KO:K19227 ]
KO11_16350 sapC; antimicrobial peptide ABC transporter permease SapC [KO:K19228 ]
KO11_16355 sapD; antimicrobial peptide ABC transporter ATP-binding protein [KO:K19229 ]
KO11_16360 sapF; antimicrobial peptide ABC system ATP-binding protein SapF [KO:K19230 ]
KO11_19620 gsiB; glutathione ABC transporter substrate-binding protein GsiB [KO:K13889 ]
KO11_11740 yejA; putative oligopeptide transporter subunit, periplasmic-binding component of ABC superfamily transporter [KO:K13893 ]
KO11_11725 yejF; microcin C ABC transporter ATP-binding protein YejF [KO:K13896 ]
KO11_20705 fepB; iron-enterobactin transporter periplasmic binding protein [KO:K23185 ]
KO11_00740 fhuD; iron-hydroxamate transporter substrate-binding subunit [KO:K23227 ]
KO11_13415 znuA; high-affinity zinc transporter periplasmic component [KO:K09815 ]
KO11_08110 putative ATP-binding protein of ABC transport system [KO:K16787 ] [EC:7.-.-.-]
KO11_15600 lsrA; autoinducer 2 ABC transporter ATP-binding protein LsrA [KO:K10558 ]
KO11_17130 lolE; outer membrane-specific lipoprotein transporter subunit LolE [KO:K09808 ]
KO11_17140 ycfU; outer membrane-specific lipoprotein transporter subunit LolC [KO:K09808 ]
KO11_17135 lolD; lipoprotein transporter ATP-binding subunit [KO:K09810 ] [EC:7.6.2.-]
KO11_21335 mdlA; putative multidrug transporter membrane/ATP-binding components [KO:K18889 ]
KO11_21330 mdlB; putative multidrug transporter membrane/ATP-binding components [KO:K18890 ]
KO11_19085 cydC; cysteine/glutathione ABC transporter membrane/ATP-binding component [KO:K16012 ]
KO11_19080 cydD; cysteine/glutathione ABC transporter membrane/ATP-binding component [KO:K16013 ]
KO11_19115 macB; macrolide transporter ATP-binding/permease protein [KO:K05685 ] [EC:7.6.2.-]
KO11_11575 yojI; multidrug transporter membrane component/ATP-binding component [KO:K06159 ]
Compound
C00093 sn-Glycerol 3-phosphate
C01153 Orthophosphoric monoester
C01181 4-Trimethylammoniobutanoate
C01279 4-Amino-5-hydroxymethyl-2-methylpyrimidine
C03557 2-Aminoethylphosphonate
C03611 Galactose oligosaccharide
C03619 Methyl beta-D-galactoside
C04114 (E)-4-(Trimethylammonio)but-2-enoate
C06705 Capsular polysaccharide
C19872 N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570 alpha-1,5-L-Arabinobiose
C20571 alpha-1,5-L-Arabinotriose
C20572 alpha-1,5-L-Arabinotetraose
Reference
Authors
Tomii K, Kanehisa M.
Title
A comparative analysis of ABC transporters in complete microbial genomes.
Journal
Reference
Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
Journal
Reference
Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
Journal
Reference
Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
Journal
Reference
Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
Journal
Reference
Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
Journal
Reference
Authors
Richard-Fogal CL, Frawley ER, Kranz RG
Title
Topology and function of CcmD in cytochrome c maturation.
Journal
Reference
Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
Journal
Reference
Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
Journal
Reference
Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
Journal
Reference
Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
Journal
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