KEGG   PATHWAY: gar00630
Entry
gar00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Glutamicibacter halophytocola
Class
Metabolism; Carbohydrate metabolism
Pathway map
gar00630  Glyoxylate and dicarboxylate metabolism
gar00630

Module
gar_M00621  Glycine cleavage system [PATH:gar00630]
Other DBs
GO: 0046487 0043648
Organism
Glutamicibacter halophytocola [GN:gar]
Gene
AOZ07_02050  Isocitrate lyase [KO:K01637] [EC:4.1.3.1]
AOZ07_01720  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
AOZ07_07720  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
AOZ07_07745  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
AOZ07_12910  acetyl-CoA synthetase [KO:K01895] [EC:6.2.1.1]
AOZ07_17190  malate synthase [KO:K01638] [EC:2.3.3.9]
AOZ07_02045  malate synthase [KO:K01638] [EC:2.3.3.9]
AOZ07_11150  hypothetical protein [KO:K01647] [EC:2.3.3.1]
AOZ07_10375  acnA; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
AOZ07_14770  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AOZ07_09735  hypothetical protein [KO:K00626] [EC:2.3.1.9]
AOZ07_08315  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AOZ07_11275  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AOZ07_04490  acetyl-/propionyl-CoA carboxylase subunit alpha [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
AOZ07_03720  acetyl-/propionyl-CoA carboxylase subunit alpha [KO:K11263] [EC:6.4.1.2 6.4.1.3 6.4.1.- 6.3.4.14]
AOZ07_04595  methylmalonyl-CoA carboxyltransferase [KO:K27094] [EC:6.4.1.3 6.4.1.- 2.1.3.15]
AOZ07_13400  FAD-linked oxidase [KO:K00104] [EC:1.1.99.14]
AOZ07_02785  FAD-linked oxidase [KO:K00104] [EC:1.1.99.14]
AOZ07_07670  catalase [KO:K03781] [EC:1.11.1.6]
AOZ07_16525  glyoxylate reductase [KO:K00015] [EC:1.1.1.26]
AOZ07_09910  haloacid dehalogenase [KO:K01091] [EC:3.1.3.18]
AOZ07_05455  alanine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
AOZ07_10555  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AOZ07_10575  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AOZ07_15955  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AOZ07_13505  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AOZ07_16515  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
AOZ07_13520  glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
AOZ07_13515  glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
AOZ07_10515  dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AOZ07_13510  glycine cleavage system protein H [KO:K02437]
AOZ07_16590  glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
AOZ07_17405  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
AOZ07_16600  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
AOZ07_16595  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
AOZ07_17025  glycerate kinase [KO:K00865] [EC:2.7.1.165]
AOZ07_04015  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
AOZ07_16625  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
AOZ07_16055  hypothetical protein [KO:K01625] [EC:4.1.2.14 4.1.3.42]
AOZ07_06460  kgd; alpha-ketoglutarate decarboxylase [KO:K01616] [EC:2.2.1.5 4.1.1.71 1.2.4.2 2.3.1.61]
AOZ07_03895  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
AOZ07_16425  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
gar00010  Glycolysis / Gluconeogenesis
gar00020  Citrate cycle (TCA cycle)
gar00030  Pentose phosphate pathway
gar00053  Ascorbate and aldarate metabolism
gar00071  Fatty acid degradation
gar00230  Purine metabolism
gar00250  Alanine, aspartate and glutamate metabolism
gar00260  Glycine, serine and threonine metabolism
gar00620  Pyruvate metabolism
gar00710  Carbon fixation by Calvin cycle
gar00750  Vitamin B6 metabolism
gar00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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