KEGG   PATHWAY: gja03082
Entry
gja03082                    Pathway                                
Name
ATP-dependent chromatin remodeling - Gekko japonicus (Schlegel's Japanese gecko)
Class
Genetic Information Processing; Chromosome
Pathway map
gja03082  ATP-dependent chromatin remodeling
gja03082

Organism
Gekko japonicus (Schlegel's Japanese gecko) [GN:gja]
Gene
107120267  SMARCA5; SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [KO:K11654] [EC:5.6.2.-]
107114803  BAZ1A; bromodomain adjacent to zinc finger domain 1A [KO:K11655]
107112432  BAZ1B; bromodomain adjacent to zinc finger domain 1B [KO:K11658]
107126234  BAZ2A; bromodomain adjacent to zinc finger domain 2A [KO:K15224]
107110737  BAZ2B; bromodomain adjacent to zinc finger domain 2B [KO:K26167]
107124776  CHRAC1; chromatin accessibility complex 1 [KO:K11656]
107120422  POLE3; DNA polymerase epsilon 3, accessory subunit [KO:K02326] [EC:2.7.7.7]
107118385  RSF1; remodeling and spacing factor 1 [KO:K11657]
107121388  SMARCA1; SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1 [KO:K11727] [EC:5.6.2.-]
107120877  BPTF; bromodomain PHD finger transcription factor [KO:K11728]
107107744  RBBP4; RB binding protein 4, chromatin remodeling factor [KO:K10752]
107115452  CECR2; cat eye syndrome chromosome region, candidate 2 [KO:K25830]
107116993  chromodomain-helicase-DNA-binding protein 3-like [KO:K11642] [EC:5.6.2.-]
107118405  CHD4; chromodomain helicase DNA binding protein 4 [KO:K11643] [EC:5.6.2.-]
107107742  HDAC1; histone deacetylase 1 [KO:K06067] [EC:3.5.1.98]
107121973  histone deacetylase 2 [KO:K06067] [EC:3.5.1.98]
107114046  MBD2; methyl-CpG binding domain protein 2 [KO:K11590]
107106802  MBD3; methyl-CpG binding domain protein 3 [KO:K11591]
107109954  methyl-CpG-binding domain protein 3-like [KO:K11591]
107113100  MTA1; metastasis associated 1 [KO:K11660]
107116129  MTA3; metastasis associated 1 family member 3 [KO:K11660]
107120068  MTA2; metastasis associated 1 family member 2 [KO:K11660]
107110890  GATAD2B; GATA zinc finger domain containing 2B [KO:K23194]
107114099  GATAD2A; GATA zinc finger domain containing 2A [KO:K23194]
107115645  PHF6; PHD finger protein 6 [KO:K23310]
107117226  CDK2AP1; cyclin dependent kinase 2 associated protein 1 [KO:K26454]
107112622  CDK2AP2; cyclin dependent kinase 2 associated protein 2 [KO:K26455]
107111999  SMARCA4; SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [KO:K11647] [EC:5.6.2.-]
107122903  SMARCA2; SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [KO:K11647] [EC:5.6.2.-]
107108539  SMARCB1; SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1 [KO:K11648]
107107415  SMARCC1; SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 [KO:K11649]
107120887  SMARCC2; SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 [KO:K11649]
107125661  SMARCD2; SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [KO:K11650]
107123459  SMARCD3; SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 [KO:K11650]
107122512  SMARCD1; SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [KO:K11650]
107109608  SMARCE1; SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [KO:K11651]
107106287  actin, cytoplasmic 1-like [KO:K05692]
107108307  ACTG1; actin gamma 1 [KO:K05692]
107117852  actin, cytoplasmic type 5 [KO:K05692]
107120617  ACTL6A; actin like 6A [KO:K11340]
107124419  ACTL6B; actin like 6B [KO:K11652]
107106653  BCL7C; BCL tumor suppressor 7C [KO:K25605]
107115906  BCL7A; BCL tumor suppressor 7A [KO:K25605]
107112423  BCL7B; BCL tumor suppressor 7B [KO:K25605]
107106054  SS18L1; SS18L1, nBAF chromatin remodeling complex subunit [KO:K15623]
107124349  SS18; SS18, nBAF chromatin remodeling complex subunit [KO:K15623]
107108901  ARID1A; AT-rich interaction domain 1A [KO:K11653]
107123945  ARID1B; AT-rich interaction domain 1B [KO:K11653]
107117879  DPF3; double PHD fingers 3 [KO:K22198]
107106396  zinc finger protein neuro-d4-like [KO:K22198]
107111053  DPF2; double PHD fingers 2 [KO:K13196]
107109210  ARID2; AT-rich interaction domain 2 [KO:K11765]
107121788  PBRM1; polybromo 1 [KO:K11757]
107117181  BRD7; bromodomain containing 7 [KO:K11723]
107113989  PHF10; PHD finger protein 10 [KO:K22197]
107115922  BRD9; bromodomain containing 9 [KO:K22184]
107116945  GLTSCR1; glioma tumor suppressor candidate region gene 1 [KO:K25612]
107110333  GLTSCR1L; GLTSCR1 like [KO:K25613]
107126026  INO80; INO80 complex subunit [KO:K11665] [EC:5.6.2.-]
107115838  INO80B; INO80 complex subunit B [KO:K11666]
107107896  INO80C; INO80 complex subunit C [KO:K11667]
107114492  INO80D; INO80 complex subunit D [KO:K11668]
107117439  INO80E; INO80 complex subunit E [KO:K11669]
107113160  TFPT; TCF3 fusion partner [KO:K11670]
107114349  NFRKB; nuclear factor related to kappaB binding protein [KO:K11671]
107105851  MCRS1; microspherule protein 1 [KO:K11674]
107123223  UCHL5; ubiquitin C-terminal hydrolase L5 [KO:K05610] [EC:3.4.19.12]
107122946  RUVBL1; RuvB like AAA ATPase 1 [KO:K04499] [EC:5.6.2.4]
107119270  RUVBL2; RuvB like AAA ATPase 2 [KO:K11338] [EC:5.6.2.3]
107113848  ACTR5; ARP5 actin-related protein 5 homolog [KO:K11672]
107116831  ACTR8; ARP8 actin-related protein 8 homolog [KO:K11673]
107121525  YY1; YY1 transcription factor [KO:K09201]
107111212  SRCAP; Snf2 related CREBBP activator protein [KO:K11661] [EC:5.6.2.-]
107120285  DMAP1; DNA methyltransferase 1 associated protein 1 [KO:K11324]
107105710  YEATS4; YEATS domain containing 4 [KO:K11341]
107121576  VPS72; vacuolar protein sorting 72 homolog [KO:K11664]
107107818  histone H2A.V [KO:K11251]
107106730  histone H2A-like [KO:K11251]
107126180  histone H2A-beta, sperm-like [KO:K11251]
107121180  core histone macro-H2A.1 [KO:K11251]
107124560  late histone H2A.2.2 [KO:K11251]
107121955  histone H2A-like [KO:K11251]
107121956  histone H2A-beta, sperm-like [KO:K11251]
107122144  histone H2A type 2-C [KO:K11251]
107122146  histone H2A type 2-B [KO:K11251]
107114477  histone H2A.Z [KO:K11251]
107124978  histone H2A, sperm-like [KO:K11251]
107113424  histone H2A type 2-B-like [KO:K11251]
107115709  histone H2A-IV-like [KO:K11251]
107120256  core histone macro-H2A.2 [KO:K11251]
107118165  histone H2A-IV [KO:K11251]
107118166  histone H2A type 1-E [KO:K11251]
107118182  histone H2A type 2-C-like [KO:K11251]
107121820  ACTR6; ARP6 actin-related protein 6 homolog [KO:K11662]
107118176  ZNHIT1; zinc finger HIT-type containing 1 [KO:K11663]
107116768  TRRAP; transformation/transcription domain associated protein [KO:K08874]
107116558  mortality factor 4-like protein 1 [KO:K11339]
107116029  MRG/MORF4L-binding protein-like [KO:K11343]
107115785  MRGBP; MRG domain binding protein [KO:K11343]
107111540  BRD8; bromodomain containing 8 [KO:K11321]
107111680  ING3; inhibitor of growth family member 3 [KO:K11319]
107107788  EPC1; enhancer of polycomb homolog 1 [KO:K11322]
107120380  EPC2; enhancer of polycomb homolog 2 [KO:K11322]
107110146  MEAF6; MYST/Esa1 associated factor 6 [KO:K11344]
107115218  KAT5; lysine acetyltransferase 5 [KO:K11304] [EC:2.3.1.48]
Reference
PMID:31769422
  Authors
Hasan N, Ahuja N
  Title
The Emerging Roles of ATP-Dependent Chromatin Remodeling Complexes in Pancreatic Cancer.
  Journal
Cancers (Basel) 11:cancers11121859 (2019)
DOI:10.3390/cancers11121859
Reference
PMID:32001526
  Authors
He S, Wu Z, Tian Y, Yu Z, Yu J, Wang X, Li J, Liu B, Xu Y
  Title
Structure of nucleosome-bound human BAF complex.
  Journal
Science 367:875-881 (2020)
DOI:10.1126/science.aaz9761
Reference
PMID:33941852
  Authors
Wanior M, Kramer A, Knapp S, Joerger AC
  Title
Exploiting vulnerabilities of SWI/SNF chromatin remodelling complexes for cancer therapy.
  Journal
Oncogene 40:3637-3654 (2021)
DOI:10.1038/s41388-021-01781-x
Reference
PMID:20493981
  Authors
Burgio G, Onorati MC, Corona DF
  Title
Chromatin remodeling regulation by small molecules and metabolites.
  Journal
Biochim Biophys Acta 1799:671-80 (2010)
DOI:10.1016/j.bbagrm.2010.05.007
KO pathway
ko03082   
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