KEGG   PATHWAY: gmx00710
Entry
gmx00710                    Pathway                                
Name
Carbon fixation in photosynthetic organisms - Glycine max (soybean)
Class
Metabolism; Energy metabolism
Pathway map
gmx00710  Carbon fixation in photosynthetic organisms
gmx00710

Module
gmx_M00165  Reductive pentose phosphate cycle (Calvin cycle) [PATH:gmx00710]
gmx_M00168  CAM (Crassulacean acid metabolism), dark [PATH:gmx00710]
gmx_M00169  CAM (Crassulacean acid metabolism), light [PATH:gmx00710]
gmx_M00170  C4-dicarboxylic acid cycle, phosphoenolpyruvate carboxykinase type [PATH:gmx00710]
gmx_M00171  C4-dicarboxylic acid cycle, NAD - malic enzyme type [PATH:gmx00710]
gmx_M00172  C4-dicarboxylic acid cycle, NADP - malic enzyme type [PATH:gmx00710]
Organism
Glycine max (soybean) [GN:gmx]
Gene
3989271  rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
547605  ribulose-1,5-bisphosphate carboxylase small subunit rbcS2 [KO:K01602] [EC:4.1.1.39]
100527679  putative ribulose bisphosphate carboxylase small chain [KO:K01602] [EC:4.1.1.39]
100794277  ribulose bisphosphate carboxylase small chain 4, chloroplastic [KO:K01602] [EC:4.1.1.39]
100500504  RBCS-1; ribulose bisphosphate carboxylase small chain 1, chloroplastic [KO:K01602] [EC:4.1.1.39]
100801951  putative phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
100796458  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
100795933  phosphoglycerate kinase, cytosolic [KO:K00927] [EC:2.7.2.3]
100802480  phosphoglycerate kinase, cytosolic [KO:K00927] [EC:2.7.2.3]
100778356  phosphoglycerate kinase isoform X1 [KO:K00927] [EC:2.7.2.3]
100782924  uncharacterized protein LOC100782924 [KO:K00134] [EC:1.2.1.12]
100807342  uncharacterized protein LOC100807342 [KO:K00134] [EC:1.2.1.12]
100804853  glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic [KO:K00134] [EC:1.2.1.12]
100037457  GAPC1; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
100781161  glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
100783902  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
100794095  glyceraldehyde-3-phosphate dehydrogenase, cytosolic isoform X2 [KO:K00134] [EC:1.2.1.12]
547514  GAPDH; glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
100789951  glyceraldehyde-3-phosphate dehydrogenase GAPCP1, chloroplastic [KO:K00134] [EC:1.2.1.12]
100810217  glyceraldehyde-3-phosphate dehydrogenase, cytosolic [KO:K00134] [EC:1.2.1.12]
732571  glyceraldehyde-3-phosphate dehydrogenase B subunit isoform 2 [KO:K05298] [EC:1.2.1.13]
732655  glyceraldehyde-3-phosphate dehydrogenase A subunit [KO:K05298] [EC:1.2.1.13]
100815649  glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic [KO:K05298] [EC:1.2.1.13]
100806482  uncharacterized protein LOC100806482 [KO:K05298] [EC:1.2.1.13]
100527532  fructose-bisphosphate aldolase 6, cytosolic [KO:K01623] [EC:4.1.2.13]
100778363  fructose-bisphosphate aldolase, cytoplasmic isozyme-like [KO:K01623] [EC:4.1.2.13]
100786504  putative fructose-bisphosphate aldolase 3, chloroplastic [KO:K01623] [EC:4.1.2.13]
100818383  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
100818915  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
100798677  fructose-bisphosphate aldolase 1, chloroplastic [KO:K01623] [EC:4.1.2.13]
100795446  uncharacterized protein LOC100795446 [KO:K01623] [EC:4.1.2.13]
100775844  putative fructose-bisphosphate aldolase 2 [KO:K01623] [EC:4.1.2.13]
100802732  fructose-bisphosphate aldolase 3, chloroplastic [KO:K01623] [EC:4.1.2.13]
547751  FBA; fructose-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
100792394  fructose-bisphosphate aldolase, cytoplasmic isozyme 1 [KO:K01623] [EC:4.1.2.13]
100815070  fructose-bisphosphate aldolase 6, cytosolic [KO:K01623] [EC:4.1.2.13]
100783089  putative fructose-bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
100815943  fructose-1,6-bisphosphatase [KO:K03841] [EC:3.1.3.11]
100793620  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
100812684  uncharacterized protein LOC100812684 [KO:K03841] [EC:3.1.3.11]
100787135  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
100797157  fructose-1,6-bisphosphatase, cytosolic [KO:K03841] [EC:3.1.3.11]
547809  FBP; fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
100807451  fructose-1,6-bisphosphatase, cytosolic isoform X1 [KO:K03841] [EC:3.1.3.11]
100799873  fructose-1,6-bisphosphatase, chloroplastic [KO:K03841] [EC:3.1.3.11]
100781676  transketolase, chloroplastic isoform X1 [KO:K00615] [EC:2.2.1.1]
100818028  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
100805786  transketolase, chloroplastic [KO:K00615] [EC:2.2.1.1]
100788090  sedoheptulose-1,7-bisphosphatase, chloroplastic isoform X2 [KO:K01100] [EC:3.1.3.37]
100786122  sedoheptulose-1,7-bisphosphatase, chloroplastic [KO:K01100] [EC:3.1.3.37]
100792666  probable ribose-5-phosphate isomerase [KO:K01807] [EC:5.3.1.6]
100790894  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
100795150  probable ribose-5-phosphate isomerase 2 [KO:K01807] [EC:5.3.1.6]
100783936  probable ribose-5-phosphate isomerase 4, chloroplastic [KO:K01807] [EC:5.3.1.6]
100781866  probable ribose-5-phosphate isomerase 3, chloroplastic [KO:K01807] [EC:5.3.1.6]
100777515  phosphoribulokinase, chloroplastic [KO:K00855] [EC:2.7.1.19]
100807126  phosphoribulokinase, chloroplastic [KO:K00855] [EC:2.7.1.19]
100796274  putative triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
100799358  uncharacterized protein LOC100799358 [KO:K01803] [EC:5.3.1.1]
100798459  uncharacterized protein LOC100798459 [KO:K01803] [EC:5.3.1.1]
100819824  triosephosphate isomerase, chloroplastic [KO:K01803] [EC:5.3.1.1]
547761  triosephosphate isomerase [KO:K01803] [EC:5.3.1.1]
100812398  triosephosphate isomerase, chloroplastic [KO:K01803] [EC:5.3.1.1]
100527490  putative ribulose phosphate 3-epimerase [KO:K01783] [EC:5.1.3.1]
100786514  ribulose-phosphate 3-epimerase, chloroplastic [KO:K01783] [EC:5.1.3.1]
100817791  putative D-ribulose-5-phosphate-3-epimerase [KO:K01783] [EC:5.1.3.1]
100500085  ribulose-phosphate 3-epimerase, cytoplasmic isoform isoform X1 [KO:K01783] [EC:5.1.3.1]
547755  PEPC17; phosphoenolpyruvate carboxylase [KO:K01595] [EC:4.1.1.31]
547756  PEPC4; phosphoenolpyruvate carboxylase [KO:K01595] [EC:4.1.1.31]
100807407  phosphoenolpyruvate carboxylase 2 [KO:K01595] [EC:4.1.1.31]
100820574  phosphoenolpyruvate carboxylase, housekeeping isozyme-like [KO:K01595] [EC:4.1.1.31]
100805069  PPC1; phosphoenolpyruvate carboxylase [KO:K01595] [EC:4.1.1.31]
547456  PEPC7; phosphoenolpyruvate carboxylase [KO:K01595] [EC:4.1.1.31]
547769  PEPC16; phosphoenolpyruvate carboxylase, housekeeping isozyme [KO:K01595] [EC:4.1.1.31]
100812219  phosphoenolpyruvate carboxylase 2 [KO:K01595] [EC:4.1.1.31]
100785020  phosphoenolpyruvate carboxylase 4 [KO:K01595] [EC:4.1.1.31]
547509  AAT; aspartate aminotransferase glyoxysomal isozyme AAT1 precursor [KO:K14454] [EC:2.6.1.1]
100804162  aspartate aminotransferase [KO:K14454] [EC:2.6.1.1]
100777507  phosphoenolpyruvate carboxykinase (ATP) 1 isoform X1 [KO:K01610] [EC:4.1.1.49]
100791015  phosphoenolpyruvate carboxykinase (ATP) 1 [KO:K01610] [EC:4.1.1.49]
100781710  phosphoenolpyruvate carboxykinase (ATP) 1 [KO:K01610] [EC:4.1.1.49]
100777147  phosphoenolpyruvate carboxykinase (ATP) 1 [KO:K01610] [EC:4.1.1.49]
100789390  phosphoenolpyruvate carboxykinase (ATP) 2 isoform X1 [KO:K01610] [EC:4.1.1.49]
100786257  phosphoenolpyruvate carboxykinase (ATP) 1 [KO:K01610] [EC:4.1.1.49]
106794362  phosphoenolpyruvate carboxykinase (ATP) 2 [KO:K01610] [EC:4.1.1.49]
100776235  alanine aminotransferase 2 [KO:K00814] [EC:2.6.1.2]
100127413  ALAAT1; alanine aminotransferase 1 [KO:K00814] [EC:2.6.1.2]
100127414  ALAAT2; alanine aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
100787173  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
100786435  pyruvate, phosphate dikinase, chloroplastic [KO:K01006] [EC:2.7.9.1]
100797319  pyruvate, phosphate dikinase, chloroplastic-like isoform X1 [KO:K01006] [EC:2.7.9.1]
100796117  NADP-dependent malic enzyme [KO:K00029] [EC:1.1.1.40]
100785718  NADP-dependent malic enzyme [KO:K00029] [EC:1.1.1.40]
100801564  NADP-dependent malic enzyme isoform X3 [KO:K00029] [EC:1.1.1.40]
100818219  NADP-dependent malic enzyme isoform X3 [KO:K00029] [EC:1.1.1.40]
100782096  NADP-dependent malic enzyme isoform X1 [KO:K00029] [EC:1.1.1.40]
100784112  NADP-dependent malic enzyme [KO:K00029] [EC:1.1.1.40]
100800844  NADP-dependent malic enzyme [KO:K00029] [EC:1.1.1.40]
100804607  LOW QUALITY PROTEIN: NADP-dependent malic enzyme [KO:K00029] [EC:1.1.1.40]
100791514  NADP-dependent malic enzyme [KO:K00029] [EC:1.1.1.40]
100782567  malate dehydrogenase [NADP], chloroplastic [KO:K00051] [EC:1.1.1.82]
547813  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
100814593  aspartate aminotransferase, mitochondrial [KO:K14455] [EC:2.6.1.1]
100783188  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
100811402  malate dehydrogenase, cytoplasmic-like [KO:K00025] [EC:1.1.1.37]
547963  cytosolic malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
100777296  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
100799793  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
100170735  peroxisomal malate dehydrogenase [KO:K00026] [EC:1.1.1.37]
606509  MDH-1; malate dehydrogenase [KO:K00026] [EC:1.1.1.37]
732641  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
100783173  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
100814078  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
100814425  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
106797956  malate dehydrogenase 1, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
100811081  NAD-dependent malic enzyme 2, mitochondrial [KO:K00028] [EC:1.1.1.39]
100806545  NAD-dependent malic enzyme 59 kDa isoform, mitochondrial [KO:K00028] [EC:1.1.1.39]
100799344  NAD-dependent malic enzyme 62 kDa isoform, mitochondrial isoform X1 [KO:K00028] [EC:1.1.1.39]
100775394  NAD-dependent malic enzyme 59 kDa isoform, mitochondrial [KO:K00028] [EC:1.1.1.39]
100795823  NAD-dependent malic enzyme 59 kDa isoform, mitochondrial [KO:K00028] [EC:1.1.1.39]
Compound
C00001  H2O
C00011  CO2
C00022  Pyruvate
C00036  Oxaloacetate
C00041  L-Alanine
C00049  L-Aspartate
C00074  Phosphoenolpyruvate
C00085  D-Fructose 6-phosphate
C00111  Glycerone phosphate
C00117  D-Ribose 5-phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00149  (S)-Malate
C00197  3-Phospho-D-glycerate
C00199  D-Ribulose 5-phosphate
C00231  D-Xylulose 5-phosphate
C00236  3-Phospho-D-glyceroyl phosphate
C00279  D-Erythrose 4-phosphate
C00354  D-Fructose 1,6-bisphosphate
C00447  Sedoheptulose 1,7-bisphosphate
C01182  D-Ribulose 1,5-bisphosphate
C05382  Sedoheptulose 7-phosphate
Related
pathway
gmx00010  Glycolysis / Gluconeogenesis
gmx00400  Phenylalanine, tyrosine and tryptophan biosynthesis
gmx00630  Glyoxylate and dicarboxylate metabolism
KO pathway
ko00710   
LinkDB

DBGET integrated database retrieval system