KEGG   PATHWAY: gog00630
Entry
gog00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Gemmata obscuriglobus
Class
Metabolism; Carbohydrate metabolism
Pathway map
gog00630  Glyoxylate and dicarboxylate metabolism
gog00630

Module
gog_M00621  Glycine cleavage system [PATH:gog00630]
Other DBs
GO: 0046487 0043648
Organism
Gemmata obscuriglobus [GN:gog]
Gene
C1280_09875  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
C1280_12670  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
C1280_00045  citrate synthase [KO:K01647] [EC:2.3.3.1]
C1280_21965  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
C1280_04310  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
C1280_25405  dehydratase [KO:K17865] [EC:4.2.1.55]
C1280_19540  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
C1280_23085  dehydrogenase [KO:K11472] [EC:1.1.99.14]
C1280_23090  hypothetical protein [KO:K11473] [EC:1.1.99.14]
C1280_34665  catalase [KO:K03781] [EC:1.11.1.6]
C1280_04965  catalase HPII [KO:K03781] [EC:1.11.1.6]
C1280_30115  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
C1280_29575  carotenoid oxygenase [KO:K01091] [EC:3.1.3.18]
C1280_01385  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
C1280_36010  haloacid dehalogenase [KO:K01091] [EC:3.1.3.18]
C1280_14580  alanine--glyoxylate aminotransferase family protein [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
C1280_01440  glutamate synthase large subunit [KO:K00284] [EC:1.4.7.1]
C1280_29050  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
C1280_30290  glutamine synthetase type III [KO:K01915] [EC:6.3.1.2]
C1280_16255  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
C1280_04095  aminomethyl-transferring glycine dehydrogenase [KO:K00282] [EC:1.4.4.2]
C1280_04075  glycine dehydrogenase subunit 2 [KO:K00283] [EC:1.4.4.2]
C1280_04105  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
C1280_32540  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
C1280_37035  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
C1280_04100  gcvH; glycine cleavage system protein H [KO:K02437]
C1280_15475  glycine cleavage system protein H [KO:K02437]
C1280_12975  glycerate kinase [KO:K11529] [EC:2.7.1.165]
C1280_33005  3-isopropylmalate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
C1280_19800  2-dehydro-3-deoxyphosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
C1280_34625  cupin domain-containing protein [KO:K01569] [EC:4.1.1.2]
C1280_13155  fdnG; formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
C1280_13150  dehydrogenase [KO:K00123] [EC:1.17.1.9]
C1280_23995  NADH-quinone oxidoreductase subunit L [KO:K22515] [EC:1.17.1.9]
C1280_13160  4Fe-4S dicluster domain-containing protein [KO:K00124]
C1280_20160  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
gog00010  Glycolysis / Gluconeogenesis
gog00020  Citrate cycle (TCA cycle)
gog00030  Pentose phosphate pathway
gog00053  Ascorbate and aldarate metabolism
gog00071  Fatty acid degradation
gog00230  Purine metabolism
gog00250  Alanine, aspartate and glutamate metabolism
gog00260  Glycine, serine and threonine metabolism
gog00620  Pyruvate metabolism
gog00710  Carbon fixation by Calvin cycle
gog00750  Vitamin B6 metabolism
gog00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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