KEGG   PATHWAY: halw00630
Entry
halw00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Halomonas alkalicola
Class
Metabolism; Carbohydrate metabolism
Pathway map
halw00630  Glyoxylate and dicarboxylate metabolism
halw00630

Module
halw_M00012  Glyoxylate cycle [PATH:halw00630]
Other DBs
GO: 0046487 0043648
Organism
Halomonas alkalicola [GN:halw]
Gene
B6N23_04960  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
B6N23_16130  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
B6N23_09485  malate synthase G [KO:K01638] [EC:2.3.3.9]
B6N23_14360  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
B6N23_05090  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
B6N23_12145  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
B6N23_03315  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
B6N23_06095  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
B6N23_09100  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
B6N23_11005  bktB; beta-ketothiolase BktB [KO:K00626] [EC:2.3.1.9]
B6N23_16120  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
B6N23_08005  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
B6N23_13525  glcD; glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
B6N23_13520  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
B6N23_13515  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
B6N23_13810  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
B6N23_00900  D-2-hydroxyacid dehydrogenase [KO:K00018] [EC:1.1.1.29]
B6N23_03790  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
B6N23_15105  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
B6N23_04655  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
B6N23_04690  glutamine synthetase family protein [KO:K01915] [EC:6.3.1.2]
B6N23_11235  glnA; glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
B6N23_13400  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
B6N23_10850  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
B6N23_14170  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
B6N23_01080  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
B6N23_01065  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
B6N23_01075  gcvH; glycine cleavage system protein GcvH [KO:K02437]
B6N23_13595  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
B6N23_13600  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
B6N23_13605  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
B6N23_08185  glycerate kinase [KO:K00865] [EC:2.7.1.165]
B6N23_13610  MOFRL family protein [KO:K11529] [EC:2.7.1.165]
B6N23_13485  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
B6N23_13950  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
B6N23_06385  molybdopterin-dependent oxidoreductase [KO:K00123] [EC:1.17.1.9]
B6N23_06390  NAD(P)H-dependent oxidoreductase subunit E [KO:K22515] [EC:1.17.1.9]
B6N23_00495  fdh3B; formate dehydrogenase FDH3 subunit beta [KO:K00124]
B6N23_00490  formate dehydrogenase subunit gamma [KO:K00127]
B6N23_10880  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
B6N23_16850  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
halw00010  Glycolysis / Gluconeogenesis
halw00020  Citrate cycle (TCA cycle)
halw00030  Pentose phosphate pathway
halw00053  Ascorbate and aldarate metabolism
halw00071  Fatty acid degradation
halw00230  Purine metabolism
halw00250  Alanine, aspartate and glutamate metabolism
halw00260  Glycine, serine and threonine metabolism
halw00620  Pyruvate metabolism
halw00710  Carbon fixation by Calvin cycle
halw00750  Vitamin B6 metabolism
halw00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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