KEGG   PATHWAY: haso00630
Entry
haso00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Halomonas sp. 'Soap Lake #7'
Class
Metabolism; Carbohydrate metabolism
Pathway map
haso00630  Glyoxylate and dicarboxylate metabolism
haso00630

Module
haso_M00012  Glyoxylate cycle [PATH:haso00630]
haso_M00621  Glycine cleavage system [PATH:haso00630]
Other DBs
GO: 0046487 0043648
Organism
Halomonas sp. 'Soap Lake #7' [GN:haso]
Gene
B2G49_03365  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
B2G49_00190  acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
B2G49_10100  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
B2G49_17860  malate synthase G [KO:K01638] [EC:2.3.3.9]
B2G49_04050  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
B2G49_03140  citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
B2G49_21090  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
B2G49_08095  bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
B2G49_10000  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
B2G49_10110  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
B2G49_14610  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
B2G49_17515  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
B2G49_14240  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
B2G49_00335  glycolate oxidase subunit GlcD [KO:K00104] [EC:1.1.99.14]
B2G49_00330  glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
B2G49_00325  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
B2G49_03105  catalase [KO:K03781] [EC:1.11.1.6]
B2G49_12690  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
B2G49_17485  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
B2G49_07085  glycerate dehydrogenase [KO:K00018] [EC:1.1.1.29]
B2G49_20720  hypothetical protein [KO:K01091] [EC:3.1.3.18]
B2G49_04030  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
B2G49_05440  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
B2G49_20400  type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
B2G49_15465  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
B2G49_02040  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
B2G49_10710  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
B2G49_16330  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
B2G49_06890  glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
B2G49_06910  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
B2G49_03175  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
B2G49_17235  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
B2G49_06895  glycine cleavage system protein H [KO:K02437]
B2G49_16735  glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
B2G49_00510  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
B2G49_16730  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
B2G49_16725  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
B2G49_21615  glycerate kinase [KO:K00865] [EC:2.7.1.165]
B2G49_16720  glycerate kinase [KO:K11529] [EC:2.7.1.165]
B2G49_01750  aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
B2G49_11320  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
B2G49_09570  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
B2G49_14895  formate dehydrogenase [KO:K00123] [EC:1.17.1.9]
B2G49_16355  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
B2G49_16360  NADH-quinone oxidoreductase subunit F [KO:K22515] [EC:1.17.1.9]
B2G49_14890  formate dehydrogenase [KO:K00124]
B2G49_14885  formate dehydrogenase subunit gamma [KO:K00127]
B2G49_06050  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
B2G49_10535  esterase [KO:K01432] [EC:3.5.1.9]
B2G49_08155  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
B2G49_16305  formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
B2G49_17690  formamidase [KO:K01455] [EC:3.5.1.49]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
haso00010  Glycolysis / Gluconeogenesis
haso00020  Citrate cycle (TCA cycle)
haso00030  Pentose phosphate pathway
haso00053  Ascorbate and aldarate metabolism
haso00071  Fatty acid degradation
haso00230  Purine metabolism
haso00250  Alanine, aspartate and glutamate metabolism
haso00260  Glycine, serine and threonine metabolism
haso00620  Pyruvate metabolism
haso00710  Carbon fixation by Calvin cycle
haso00750  Vitamin B6 metabolism
haso00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

DBGET integrated database retrieval system