KEGG   PATHWAY: hbr00630
Entry
hbr00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Hevea brasiliensis (rubber tree)
Class
Metabolism; Carbohydrate metabolism
Pathway map
hbr00630  Glyoxylate and dicarboxylate metabolism
hbr00630

Module
hbr_M00012  Glyoxylate cycle [PATH:hbr00630]
hbr_M00532  Photorespiration [PATH:hbr00630]
hbr_M00621  Glycine cleavage system [PATH:hbr00630]
Other DBs
GO: 0046487 0043648
Organism
Hevea brasiliensis (rubber tree) [GN:hbr]
Gene
110632150  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
110652235  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal isoform X1 [KO:K01895] [EC:6.2.1.1]
110639839  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like isoform X1 [KO:K01895] [EC:6.2.1.1]
110632938  acetate/butyrate--CoA ligase AAE7, peroxisomal-like isoform X1 [KO:K01913] [EC:6.2.1.1 6.2.1.2]
110632937  acetate/butyrate--CoA ligase AAE7, peroxisomal-like [KO:K01913] [EC:6.2.1.1 6.2.1.2]
110665281  LOW QUALITY PROTEIN: malate synthase, glyoxysomal [KO:K01638] [EC:2.3.3.9]
110659499  malate dehydrogenase, cytoplasmic [KO:K00025] [EC:1.1.1.37]
110663057  malate dehydrogenase-like [KO:K00025] [EC:1.1.1.37]
110663047  malate dehydrogenase, cytoplasmic-like isoform X1 [KO:K00025] [EC:1.1.1.37]
110635465  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
110652548  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
110648286  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
110666160  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
110650768  malate dehydrogenase, chloroplastic-like [KO:K00026] [EC:1.1.1.37]
110670369  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
110646459  malate dehydrogenase, glyoxysomal-like [KO:K00026] [EC:1.1.1.37]
110644653  malate dehydrogenase, glyoxysomal isoform X1 [KO:K00026] [EC:1.1.1.37]
110669333  citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
110658976  citrate synthase, glyoxysomal-like [KO:K01647] [EC:2.3.3.1]
110644263  LOW QUALITY PROTEIN: citrate synthase, mitochondrial-like [KO:K01647] [EC:2.3.3.1]
110663509  citrate synthase, glyoxysomal [KO:K01647] [EC:2.3.3.1]
110672582  aconitate hydratase 1-like isoform X1 [KO:K01681] [EC:4.2.1.3]
110632429  aconitate hydratase, cytoplasmic [KO:K01681] [EC:4.2.1.3]
110642217  aconitate hydratase 1 isoform X1 [KO:K01681] [EC:4.2.1.3]
110647342  acetyl-CoA acetyltransferase, cytosolic 1 [KO:K00626] [EC:2.3.1.9]
110637243  acetyl-CoA acetyltransferase, cytosolic 1 [KO:K00626] [EC:2.3.1.9]
110641512  acetyl-CoA acetyltransferase, cytosolic 1-like [KO:K00626] [EC:2.3.1.9]
110646575  peroxisomal (S)-2-hydroxy-acid oxidase GLO1 isoform X1 [KO:K11517] [EC:1.1.3.15]
110664770  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like [KO:K11517] [EC:1.1.3.15]
110664782  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like [KO:K11517] [EC:1.1.3.15]
110635601  peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [KO:K11517] [EC:1.1.3.15]
110660630  catalase-2 [KO:K03781] [EC:1.11.1.6]
110660979  catalase isozyme 2-like isoform X1 [KO:K03781] [EC:1.11.1.6]
110660980  catalase isozyme 1 [KO:K03781] [EC:1.11.1.6]
110654391  catalase isozyme 1-like isoform X1 [KO:K03781] [EC:1.11.1.6]
110654392  catalase isozyme 2 [KO:K03781] [EC:1.11.1.6]
110638723  catalase isozyme 2-like [KO:K03781] [EC:1.11.1.6]
110635861  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
110669044  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
110669059  glyoxylate/hydroxypyruvate reductase HPR3-like isoform X1 [KO:K15919] [EC:1.1.1.79 1.1.1.81]
110669061  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
110650428  glyoxylate/succinic semialdehyde reductase 1 [KO:K18121] [EC:1.1.1.79 1.1.1.-]
110642287  glyoxylate/succinic semialdehyde reductase 2, chloroplastic [KO:K18121] [EC:1.1.1.79 1.1.1.-]
110638667  glycerate dehydrogenase [KO:K15893] [EC:1.1.1.29]
110656819  phosphoglycolate phosphatase 2 [KO:K19269] [EC:3.1.3.18 3.1.3.48]
110632817  phosphoglycolate phosphatase 1B, chloroplastic-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
110642698  phosphoglycolate phosphatase 1B, chloroplastic-like [KO:K19269] [EC:3.1.3.18 3.1.3.48]
10351912  rbcL; ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
110668645  uncharacterized protein LOC110668645 [KO:K01601] [EC:4.1.1.39]
110657546  ribulose bisphosphate carboxylase small chain, chloroplastic-like [KO:K01602] [EC:4.1.1.39]
110661450  ribulose bisphosphate carboxylase small chain, chloroplastic [KO:K01602] [EC:4.1.1.39]
110646335  ribulose bisphosphate carboxylase small chain clone 512-like [KO:K01602] [EC:4.1.1.39]
110658255  ribulose bisphosphate carboxylase small chain clone 512-like [KO:K01602] [EC:4.1.1.39]
110658256  ribulose bisphosphate carboxylase small chain clone 512-like [KO:K01602] [EC:4.1.1.39]
110634391  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
110634392  serine--glyoxylate aminotransferase-like [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
110638614  serine--glyoxylate aminotransferase-like isoform X1 [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
110645911  glutamate--glyoxylate aminotransferase 2-like isoform X1 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
110640694  glutamate--glyoxylate aminotransferase 2 isoform X1 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
110658224  ferredoxin-dependent glutamate synthase, chloroplastic [KO:K00284] [EC:1.4.7.1]
110664043  ferredoxin-dependent glutamate synthase, chloroplastic-like [KO:K00284] [EC:1.4.7.1]
110640854  glutamine synthetase leaf isozyme, chloroplastic [KO:K01915] [EC:6.3.1.2]
110647574  glutamine synthetase leaf isozyme, chloroplastic-like [KO:K01915] [EC:6.3.1.2]
110663870  glutamine synthetase nodule isozyme-like [KO:K01915] [EC:6.3.1.2]
110672051  glutamine synthetase cytosolic isozyme 2-like [KO:K01915] [EC:6.3.1.2]
110645923  glutamine synthetase cytosolic isozyme 2 [KO:K01915] [EC:6.3.1.2]
110645924  glutamine synthetase nodule isozyme isoform X1 [KO:K01915] [EC:6.3.1.2]
110645987  glutamine synthetase nodule isozyme-like [KO:K01915] [EC:6.3.1.2]
110658736  serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
110655811  serine hydroxymethyltransferase, mitochondrial-like isoform X1 [KO:K00600] [EC:2.1.2.1]
110645242  serine hydroxymethyltransferase, mitochondrial-like [KO:K00600] [EC:2.1.2.1]
110644800  serine hydroxymethyltransferase 3, chloroplastic-like isoform X1 [KO:K00600] [EC:2.1.2.1]
110645039  serine hydroxymethyltransferase 4-like [KO:K00600] [EC:2.1.2.1]
110647231  serine hydroxymethyltransferase 7 isoform X1 [KO:K00600] [EC:2.1.2.1]
110671650  serine hydroxymethyltransferase 4 [KO:K00600] [EC:2.1.2.1]
110671651  serine hydroxymethyltransferase 4-like [KO:K00600] [EC:2.1.2.1]
110634818  serine hydroxymethyltransferase, mitochondrial [KO:K00600] [EC:2.1.2.1]
110634555  serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
110645328  glycine dehydrogenase (decarboxylating), mitochondrial isoform X1 [KO:K00281] [EC:1.4.4.2]
110631751  glycine dehydrogenase (decarboxylating), mitochondrial-like [KO:K00281] [EC:1.4.4.2]
110670622  aminomethyltransferase, mitochondrial-like [KO:K00605] [EC:2.1.2.10]
110670638  aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
110633344  aminomethyltransferase, mitochondrial-like [KO:K00605] [EC:2.1.2.10]
110637222  dihydrolipoyl dehydrogenase 1, mitochondrial-like [KO:K00382] [EC:1.8.1.4]
110632966  dihydrolipoyl dehydrogenase 1, chloroplastic-like [KO:K00382] [EC:1.8.1.4]
110633099  dihydrolipoyl dehydrogenase 2, chloroplastic [KO:K00382] [EC:1.8.1.4]
110633025  dihydrolipoyl dehydrogenase 1, mitochondrial [KO:K00382] [EC:1.8.1.4]
110653909  glycine cleavage system H protein 2, mitochondrial-like [KO:K02437]
110654832  glycine cleavage system H protein 2, mitochondrial-like [KO:K02437]
110642144  glycine cleavage system H protein, mitochondrial-like [KO:K02437]
110653825  D-glycerate 3-kinase, chloroplastic-like isoform X1 [KO:K15918] [EC:2.7.1.31]
110653827  D-glycerate 3-kinase, chloroplastic-like [KO:K15918] [EC:2.7.1.31]
110657570  formate dehydrogenase, mitochondrial [KO:K00122] [EC:1.17.1.9]
110666108  formate dehydrogenase, mitochondrial-like [KO:K00122] [EC:1.17.1.9]
110666049  formyltetrahydrofolate deformylase 1, mitochondrial-like [KO:K01433] [EC:3.5.1.10]
110651537  uncharacterized protein LOC110651537 isoform X1 [KO:K01455] [EC:3.5.1.49]
110658382  oxalate--CoA ligase-like [KO:K22133] [EC:6.2.1.8]
110671763  oxalate--CoA ligase-like isoform X1 [KO:K22133] [EC:6.2.1.8]
110652159  oxalate--CoA ligase-like [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
hbr00010  Glycolysis / Gluconeogenesis
hbr00020  Citrate cycle (TCA cycle)
hbr00030  Pentose phosphate pathway
hbr00053  Ascorbate and aldarate metabolism
hbr00071  Fatty acid degradation
hbr00230  Purine metabolism
hbr00250  Alanine, aspartate and glutamate metabolism
hbr00260  Glycine, serine and threonine metabolism
hbr00620  Pyruvate metabolism
hbr00710  Carbon fixation by Calvin cycle
hbr00750  Vitamin B6 metabolism
hbr00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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