KEGG   PATHWAY: hgr00630
Entry
hgr00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Hylemonella gracilis
Class
Metabolism; Carbohydrate metabolism
Pathway map
hgr00630  Glyoxylate and dicarboxylate metabolism
hgr00630

Module
hgr_M00012  Glyoxylate cycle [PATH:hgr00630]
Other DBs
GO: 0046487 0043648
Organism
Hylemonella gracilis [GN:hgr]
Gene
DW355_10570  isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
DW355_15480  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
DW355_04525  malate synthase G [KO:K01638] [EC:2.3.3.9]
DW355_14665  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
DW355_05005  citryl-CoA lyase [KO:K01647] [EC:2.3.3.1]
DW355_14700  citrate synthase [KO:K01647] [EC:2.3.3.1]
DW355_17485  acnA; aconitate hydratase AcnA [KO:K27802] [EC:4.2.1.3 4.2.1.99]
DW355_14655  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
DW355_05030  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
DW355_12780  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
DW355_11730  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
DW355_11465  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
DW355_11455  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
DW355_11445  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
DW355_01825  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
DW355_03095  glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
DW355_03090  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
DW355_03130  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
DW355_05090  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
DW355_11410  D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
DW355_09210  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
DW355_10740  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
DW355_02625  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
DW355_03905  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
DW355_03955  glnT; type III glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
DW355_09925  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
DW355_11660  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DW355_13400  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
DW355_14195  gcvH; glycine cleavage system protein GcvH [KO:K02437]
DW355_07100  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
DW355_07095  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
DW355_07090  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
DW355_16835  NAD(P)-dependent oxidoreductase [KO:K00042] [EC:1.1.1.60]
DW355_07110  glycerate kinase [KO:K11529] [EC:2.7.1.165]
DW355_17205  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
DW355_15275  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
DW355_04720  fdnG; formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
DW355_15285  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
DW355_04715  fdxH; formate dehydrogenase subunit beta [KO:K00124]
DW355_15290  formate dehydrogenase [KO:K00124]
DW355_04710  formate dehydrogenase subunit gamma [KO:K00127]
DW355_15295  formate dehydrogenase subunit gamma [KO:K00127]
DW355_16905  kynB; arylformamidase [KO:K07130] [EC:3.5.1.9]
DW355_01770  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
DW355_06820  acetamidase/formamidase family protein [KO:K01455] [EC:3.5.1.49]
DW355_03210  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
DW355_11760  oxalyl-CoA decarboxylase [KO:K01577] [EC:4.1.1.8]
DW355_11750  frc; formyl-CoA transferase [KO:K07749] [EC:2.8.3.16]
DW355_11755  frc; formyl-CoA transferase [KO:K07749] [EC:2.8.3.16]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
hgr00010  Glycolysis / Gluconeogenesis
hgr00020  Citrate cycle (TCA cycle)
hgr00030  Pentose phosphate pathway
hgr00053  Ascorbate and aldarate metabolism
hgr00071  Fatty acid degradation
hgr00230  Purine metabolism
hgr00250  Alanine, aspartate and glutamate metabolism
hgr00260  Glycine, serine and threonine metabolism
hgr00620  Pyruvate metabolism
hgr00710  Carbon fixation by Calvin cycle
hgr00750  Vitamin B6 metabolism
hgr00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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