KEGG   PATHWAY: hhf00630
Entry
hhf00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Herbaspirillum huttiense
Class
Metabolism; Carbohydrate metabolism
Pathway map
hhf00630  Glyoxylate and dicarboxylate metabolism
hhf00630

Module
hhf_M00012  Glyoxylate cycle [PATH:hhf00630]
Other DBs
GO: 0046487 0043648
Organism
Herbaspirillum huttiense [GN:hhf]
Gene
E2K99_11050  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
E2K99_00075  AMP-dependent synthetase [KO:K01895] [EC:6.2.1.1]
E2K99_07815  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
E2K99_15555  malate synthase A [KO:K01638] [EC:2.3.3.9]
E2K99_15310  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
E2K99_15275  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
E2K99_13175  helix-turn-helix domain-containing protein [KO:K01647] [EC:2.3.3.1]
E2K99_15325  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
E2K99_20870  thiolase family protein [KO:K00626] [EC:2.3.1.9]
E2K99_23165  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
E2K99_19520  thiolase domain-containing protein [KO:K00626] [EC:2.3.1.9]
E2K99_01305  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
E2K99_05520  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
E2K99_15400  3-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
E2K99_23115  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
E2K99_19560  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
E2K99_23105  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
E2K99_19555  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
E2K99_23110  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
E2K99_19550  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
E2K99_15060  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
E2K99_13205  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
E2K99_05400  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
E2K99_01895  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
E2K99_07580  D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
E2K99_08205  D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
E2K99_19985  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
E2K99_09605  HAD-IIIA family hydrolase [KO:K01091] [EC:3.1.3.18]
E2K99_05965  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
E2K99_15260  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
E2K99_07365  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
E2K99_07980  gcvH; glycine cleavage system protein GcvH [KO:K02437]
E2K99_16780  gcl; glyoxylate carboligase [KO:K01608] [EC:4.1.1.47]
E2K99_16775  hyi; hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
E2K99_16770  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
E2K99_10200  glycerate kinase [KO:K00865] [EC:2.7.1.165]
E2K99_17210  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
E2K99_07410  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
E2K99_05250  bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
E2K99_07460  formate dehydrogenase [KO:K00126] [EC:1.17.1.9]
E2K99_07450  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
E2K99_07445  NADH-quinone oxidoreductase subunit NuoF [KO:K00124]
E2K99_07440  formate dehydrogenase subunit gamma [KO:K00127]
E2K99_05330  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
E2K99_18505  alpha/beta hydrolase [KO:K01432] [EC:3.5.1.9]
E2K99_08045  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
E2K99_14020  acetamidase/formamidase family protein [KO:K01455] [EC:3.5.1.49]
E2K99_12025  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
hhf00010  Glycolysis / Gluconeogenesis
hhf00020  Citrate cycle (TCA cycle)
hhf00030  Pentose phosphate pathway
hhf00053  Ascorbate and aldarate metabolism
hhf00071  Fatty acid degradation
hhf00230  Purine metabolism
hhf00250  Alanine, aspartate and glutamate metabolism
hhf00260  Glycine, serine and threonine metabolism
hhf00620  Pyruvate metabolism
hhf00710  Carbon fixation by Calvin cycle
hhf00750  Vitamin B6 metabolism
hhf00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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