KEGG   PATHWAY: kbb00630
Entry
kbb00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Ktedonobacteria bacterium brp13
Class
Metabolism; Carbohydrate metabolism
Pathway map
kbb00630  Glyoxylate and dicarboxylate metabolism
kbb00630

Module
kbb_M00012  Glyoxylate cycle [PATH:kbb00630]
kbb_M00621  Glycine cleavage system [PATH:kbb00630]
kbb_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:kbb00630]
Other DBs
GO: 0046487 0043648
Organism
Ktedonobacteria bacterium brp13 [GN:kbb]
Gene
ccbrp13_07130  isocitrate lyase [KO:K01637] [EC:4.1.3.1 4.1.3.30]
ccbrp13_67700  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
ccbrp13_07120  malate synthase [KO:K01638] [EC:2.3.3.9]
ccbrp13_37890  malate synthase [KO:K01638] [EC:2.3.3.9]
ccbrp13_40710  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
ccbrp13_50260  citA; citrate synthase 1 [KO:K01647] [EC:2.3.3.1]
ccbrp13_36340  aconitate hydratase [KO:K27802] [EC:4.2.1.3 4.2.1.99]
ccbrp13_39760  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
ccbrp13_47270  fabG_3; beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
ccbrp13_40490  methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
ccbrp13_71170  putative acetyl/propionyl carboxylase alpha subunit AccA2 [KO:K01965] [EC:6.4.1.3]
ccbrp13_40070  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
ccbrp13_53680  methylmalonyl-CoA mutase [KO:K01849] [EC:5.4.99.2]
ccbrp13_39370  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
ccbrp13_39750  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
ccbrp13_68590  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
ccbrp13_68580  glcE; glycolate oxidase [KO:K11472] [EC:1.1.99.14]
ccbrp13_68560  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
ccbrp13_22910  catalase [KO:K03781] [EC:1.11.1.6]
ccbrp13_24870  catalase [KO:K03781] [EC:1.11.1.6]
ccbrp13_25960  catalase [KO:K03781] [EC:1.11.1.6]
ccbrp13_24780  lactate dehydrogenase [KO:K00018] [EC:1.1.1.29]
ccbrp13_19450  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
ccbrp13_54580  glutamate synthase [KO:K00284] [EC:1.4.7.1]
ccbrp13_09970  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
ccbrp13_50750  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
ccbrp13_68160  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
ccbrp13_27190  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
ccbrp13_58600  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
ccbrp13_42820  gcvPA; putative glycine dehydrogenase (decarboxylating) subunit 1 [KO:K00282] [EC:1.4.4.2]
ccbrp13_42810  gcvPB; putative glycine dehydrogenase (decarboxylating) subunit 2 [KO:K00283] [EC:1.4.4.2]
ccbrp13_42840  aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
ccbrp13_38100  acoL; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
ccbrp13_42830  gcvH; glycine cleavage system H protein [KO:K02437]
ccbrp13_26110  glycerate kinase [KO:K00865] [EC:2.7.1.165]
ccbrp13_57210  aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
ccbrp13_32100  ketohydroxyglutarate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
ccbrp13_25290  oxdD; oxalate decarboxylase [KO:K01569] [EC:4.1.1.2]
ccbrp13_29600  oxalate decarboxylase [KO:K01569] [EC:4.1.1.2]
ccbrp13_10530  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
ccbrp13_26800  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
ccbrp13_31970  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
ccbrp13_10540  4Fe-4S ferredoxin [KO:K00124]
ccbrp13_26810  ferredoxin [KO:K00124]
ccbrp13_31960  ferredoxin [KO:K00124]
ccbrp13_44450  polyketide cyclase [KO:K07130] [EC:3.5.1.9]
ccbrp13_65910  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
kbb00010  Glycolysis / Gluconeogenesis
kbb00020  Citrate cycle (TCA cycle)
kbb00030  Pentose phosphate pathway
kbb00053  Ascorbate and aldarate metabolism
kbb00071  Fatty acid degradation
kbb00230  Purine metabolism
kbb00250  Alanine, aspartate and glutamate metabolism
kbb00260  Glycine, serine and threonine metabolism
kbb00620  Pyruvate metabolism
kbb00710  Carbon fixation by Calvin cycle
kbb00750  Vitamin B6 metabolism
kbb00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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