KEGG   PATHWAY: lcat03430
Entry
lcat03430                   Pathway                                
Name
Mismatch repair - Lemur catta (Ring-tailed lemur)
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
lcat03430  Mismatch repair
lcat03430

Other DBs
GO: 0006298
Organism
Lemur catta (Ring-tailed lemur) [GN:lcat]
Gene
123647641  SSBP1; single-stranded DNA-binding protein, mitochondrial [KO:K03111]
123631536  PMS2; mismatch repair endonuclease PMS2 isoform X1 [KO:K10858]
123627319  MLH1; DNA mismatch repair protein Mlh1 isoform X1 [KO:K08734]
123636898  MSH6; DNA mismatch repair protein Msh6 isoform X1 [KO:K08737]
123636896  MSH2; DNA mismatch repair protein Msh2 isoform X1 [KO:K08735]
123648584  MSH3; DNA mismatch repair protein Msh3 isoform X1 [KO:K08736]
123646577  MLH3; DNA mismatch repair protein Mlh3 isoform X1 [KO:K08739]
123637371  RFC1; replication factor C subunit 1 isoform X1 [KO:K10754]
123630370  RFC4; replication factor C subunit 4 [KO:K10755]
123632611  RFC2; replication factor C subunit 2 isoform X1 [KO:K10755]
123648914  RFC3; replication factor C subunit 3 [KO:K10756]
123626171  RFC5; replication factor C subunit 5 [KO:K10756]
123622577  PCNA; proliferating cell nuclear antigen [KO:K04802]
123627461  EXO1; exonuclease 1 isoform X1 [KO:K10746] [EC:3.1.-.-]
123620681  RPA1; replication protein A 70 kDa DNA-binding subunit isoform X1 [KO:K07466]
123634320  RPA2; replication protein A 32 kDa subunit [KO:K10739]
123647230  RPA3; replication protein A 14 kDa subunit [KO:K10740]
123623781  POLD1; DNA polymerase delta catalytic subunit isoform X1 [KO:K02327] [EC:2.7.7.7]
123647603  POLD2; LOW QUALITY PROTEIN: DNA polymerase delta subunit 2 [KO:K02328]
123641038  POLD3; DNA polymerase delta subunit 3 isoform X1 [KO:K03504]
123642859  POLD4; DNA polymerase delta subunit 4 [KO:K03505]
123623880  LIG1; DNA ligase 1 isoform X1 [KO:K10747] [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
Related
pathway
lcat05210  Colorectal cancer
KO pathway
ko03430   
LinkDB

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