KEGG   PATHWAY: lef00630
Entry
lef00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Lelliottia jeotgali
Class
Metabolism; Carbohydrate metabolism
Pathway map
lef00630  Glyoxylate and dicarboxylate metabolism
lef00630

Module
lef_M00012  Glyoxylate cycle [PATH:lef00630]
lef_M00621  Glycine cleavage system [PATH:lef00630]
Other DBs
GO: 0046487 0043648
Organism
Lelliottia jeotgali [GN:lef]
Gene
LJPFL01_0219  Isocitrate lyase [KO:K01637] [EC:4.1.3.1]
LJPFL01_0330  Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
LJPFL01_0218  Malate synthase [KO:K01638] [EC:2.3.3.9]
LJPFL01_3775  Malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
LJPFL01_1277  Citrate synthase (si) [KO:K01647] [EC:2.3.3.1]
LJPFL01_2305  Aconitate hydratase [KO:K01681] [EC:4.2.1.3]
LJPFL01_0755  bifunctional aconitate hydratase 2-2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
LJPFL01_3366  3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
LJPFL01_1741  Catalase [KO:K03781] [EC:1.11.1.6]
LJPFL01_1570  Glyoxylate reductase [KO:K12972] [EC:1.1.1.79 1.1.1.81]
LJPFL01_0172  2-ketoaldonate reductase, broad specificity [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
LJPFL01_3903  Phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
LJPFL01_4229  Glutamine synthetase type I [KO:K01915] [EC:6.3.1.2]
LJPFL01_3090  Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
LJPFL01_3398  Glycine dehydrogenase (decarboxylating) (glycine cleavage system P protein) [KO:K00281] [EC:1.4.4.2]
LJPFL01_3400  Aminomethyltransferase (glycine cleavage system T protein) [KO:K00605] [EC:2.1.2.10]
LJPFL01_0752  Dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
LJPFL01_3399  Glycine cleavage system H protein [KO:K02437]
LJPFL01_3671  2-hydroxy-3-oxopropionate reductase [KO:K00042] [EC:1.1.1.60]
LJPFL01_3301  Glycerate kinase [KO:K00865] [EC:2.7.1.165]
LJPFL01_3670  Glycerate kinase [KO:K00865] [EC:2.7.1.165]
LJPFL01_2022  aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
LJPFL01_2485  hypothetical protein [KO:K01625] [EC:4.1.2.14 4.1.3.42]
LJPFL01_4216  Formate dehydrogenase O alpha subunit [KO:K00123] [EC:1.17.1.9]
LJPFL01_4217  Formate dehydrogenase O alpha subunit [KO:K00123] [EC:1.17.1.9]
LJPFL01_4218  Formate dehydrogenase O beta subunit [KO:K00124]
LJPFL01_4219  Formate dehydrogenase O gamma subunit [KO:K00127]
LJPFL01_2353  Formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
lef00010  Glycolysis / Gluconeogenesis
lef00020  Citrate cycle (TCA cycle)
lef00030  Pentose phosphate pathway
lef00053  Ascorbate and aldarate metabolism
lef00071  Fatty acid degradation
lef00230  Purine metabolism
lef00250  Alanine, aspartate and glutamate metabolism
lef00260  Glycine, serine and threonine metabolism
lef00620  Pyruvate metabolism
lef00710  Carbon fixation by Calvin cycle
lef00750  Vitamin B6 metabolism
lef00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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