KEGG   PATHWAY: lem00240
Entry
lem00240                    Pathway                                
Name
Pyrimidine metabolism - Lysobacter enzymogenes M497-1
Class
Metabolism; Nucleotide metabolism
Pathway map
lem00240  Pyrimidine metabolism
lem00240

Module
lem_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:lem00240]
lem_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lem00240]
lem_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:lem00240]
Other DBs
GO: 0006220 0006213
Organism
Lysobacter enzymogenes M497-1 [GN:lem]
Gene
LEN_2808  carB; carbamoyl-phosphate synthase large subunit [KO:K01955] [EC:6.3.5.5]
LEN_2810  carA; carbamoyl-phosphate synthase small subunit [KO:K01956] [EC:6.3.5.5]
LEN_3737  pyrB; aspartate carbamoyltransferase catalytic subunit [KO:K00609] [EC:2.1.3.2]
LEN_3157  dihydroorotase domain protein [KO:K01465] [EC:3.5.2.3]
LEN_3217  pyrD; dihydroorotate dehydrogenase [KO:K00254] [EC:1.3.5.2]
LEN_4686  pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
LEN_1024  pyrF; orotidine 5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
LEN_1744  pyrH; uridylate kinase [KO:K09903] [EC:2.7.4.22]
LEN_2119  ndkA; nucleoside diphosphate kinase [KO:K00940] [EC:2.7.4.6]
LEN_1215  mazG; ATP diphosphatase [KO:K04765] [EC:3.6.1.9]
LEN_1708  Maf-like protein [KO:K06287] [EC:3.6.1.-]
LEN_2941  conserved hypothetical protein [KO:K07043] [EC:3.6.1.-]
LEN_3478  pyrG; CTP synthetase [KO:K01937] [EC:6.3.4.2]
LEN_2104  cmk; cytidylate kinase [KO:K00945] [EC:2.7.4.25]
LEN_2344  5-nucleotidase [KO:K01081] [EC:3.1.3.5]
LEN_3466  surE; 5'-nucleotidase [KO:K03787] [EC:3.1.3.5 3.1.3.6]
LEN_1612  uraP; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
LEN_1544  lysine decarboxylase [KO:K06966] [EC:3.2.2.10 3.2.2.-]
LEN_0692  cytosine deaminase [KO:K03365] [EC:3.5.4.1 3.5.4.21]
LEN_1899  dcd; deoxycytidine triphosphate deaminase [KO:K01494] [EC:3.5.4.13]
LEN_3978  nrdL; ribonucleoside-diphosphate reductase subunit M1 [KO:K00525] [EC:1.17.4.1]
LEN_0772  ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent [KO:K00525] [EC:1.17.4.1]
LEN_4305  conserved hypothetical protein [KO:K00525] [EC:1.17.4.1]
LEN_3979  nrdM; ribonucleoside-diphosphate reductase subunit M2 [KO:K00526] [EC:1.17.4.1]
LEN_3268  tmk; dTMP kinase [KO:K00943] [EC:2.7.4.9]
LEN_4689  dut; dUTP pyrophosphatase [KO:K01520] [EC:3.6.1.23]
LEN_0311  tdk; thymidine kinase [KO:K00857] [EC:2.7.1.21]
LEN_1237  thymidylate synthase protein [KO:K00560] [EC:2.1.1.45]
LEN_4148  nitroreductase family protein [KO:K09019] [EC:1.1.1.-]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
lem00030  Pentose phosphate pathway
lem00220  Arginine biosynthesis
lem00250  Alanine, aspartate and glutamate metabolism
lem00280  Valine, leucine and isoleucine degradation
lem00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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