KEGG   PATHWAY: lmur03430
Entry
lmur03430                   Pathway                                
Name
Mismatch repair - Ligilactobacillus murinus
Description
DNA mismatch repair (MMR) is a highly conserved biological pathway that plays a key role in maintaining genomic stability. MMR corrects DNA mismatches generated during DNA replication, thereby preventing mutations from becoming permanent in dividing cells. MMR also suppresses homologous recombination and was recently shown to play a role in DNA damage signaling. Defects in MMR are associated with genome-wide instability, predisposition to certain types of cancer including HNPCC, resistance to certain chemotherapeutic agents, and abnormalities in meiosis and sterility in mammalian systems.
The Escherichia coli MMR pathway has been extensively studied and is well characterized. In E. coli, the mismatch-activated MutS-MutL-ATP complex licenses MutH to incise the nearest unmethylated GATC sequence. UvrD and an exonuclease generate a gap. This gap is filled by pol III and DNA ligase. The GATC sites are then methylated by Dam. Several human MMR proteins have been identified based on their homology to E. coli MMR proteins. These include human homologs of MutS and MutL. Although E. coli MutS and MutL proteins are homodimers, human MutS and MutL homologs are heterodimers. The role of hemimethylated dGATC sites as a signal for strand discrimination is not conserved from E. coli to human. Human MMR is presumed to be nick-directed in vivo, and is thought to discriminate daughter and template strands using a strand-specific nick.
Class
Genetic Information Processing; Replication and repair
Pathway map
lmur03430  Mismatch repair
lmur03430

Other DBs
GO: 0006298
Organism
Ligilactobacillus murinus [GN:lmur]
Gene
CPS94_05670  mutS; DNA mismatch repair protein MutS [KO:K03555]
CPS94_05475  endonuclease MutS2 [KO:K07456]
CPS94_05665  DNA mismatch repair endonuclease MutL [KO:K03572]
CPS94_01025  pcrA; DNA helicase PcrA [KO:K03657] [EC:5.6.2.4]
CPS94_07685  ATP-dependent DNA helicase [KO:K03657] [EC:5.6.2.4]
CPS94_03995  exodeoxyribonuclease VII large subunit [KO:K03601] [EC:3.1.11.6]
CPS94_03990  exodeoxyribonuclease VII small subunit [KO:K03602] [EC:3.1.11.6]
CPS94_04405  recJ; single-stranded-DNA-specific exonuclease RecJ [KO:K07462] [EC:3.1.-.-]
CPS94_08850  single-stranded DNA-binding protein [KO:K03111]
CPS94_03250  DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
CPS94_02700  polC; PolC-type DNA polymerase III [KO:K03763] [EC:2.7.7.7]
CPS94_08815  DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
CPS94_01350  DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
CPS94_04670  DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
CPS94_01380  DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
CPS94_06230  exonuclease [KO:K02342] [EC:2.7.7.7]
CPS94_01030  ligA; DNA ligase (NAD(+)) LigA [KO:K01972] [EC:6.5.1.2]
Reference
  Authors
Jiricny J.
  Title
The multifaceted mismatch-repair system.
  Journal
Nat Rev Mol Cell Biol 7:335-46 (2006)
DOI:10.1038/nrm1907
Reference
  Authors
Li GM.
  Title
Mechanisms and functions of DNA mismatch repair.
  Journal
Cell Res 18:85-98 (2008)
DOI:10.1038/cr.2007.115
Reference
  Authors
Marti TM, Kunz C, Fleck O.
  Title
DNA mismatch repair and mutation avoidance pathways.
  Journal
J Cell Physiol 191:28-41 (2002)
DOI:10.1002/jcp.10077
Reference
  Authors
Ikejima M, Shimada T.
  Title
[Molecular mechanism of mismatch repair]
  Journal
Tanpakushitsu Kakusan Koso 46:1124-9 (2001)
KO pathway
ko03430   
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