KEGG   PATHWAY: lub00630
Entry
lub00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Luteitalea sp. TBR-22
Class
Metabolism; Carbohydrate metabolism
Pathway map
lub00630  Glyoxylate and dicarboxylate metabolism
lub00630

Module
lub_M00621  Glycine cleavage system [PATH:lub00630]
Other DBs
GO: 0046487 0043648
Organism
Luteitalea sp. TBR-22 [GN:lub]
Gene
TBR22_A04910  acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
TBR22_A50300  hypothetical protein [KO:K00024] [EC:1.1.1.37]
TBR22_A30650  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
TBR22_A48510  citZ; citrate synthase 2 [KO:K01647] [EC:2.3.3.1]
TBR22_A21320  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
TBR22_A35510  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
TBR22_A24760  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
TBR22_A49620  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
TBR22_A52720  ptr1; pteridine reductase [KO:K00023] [EC:1.1.1.36]
TBR22_A40990  hypothetical protein [KO:K05606] [EC:5.1.99.1]
TBR22_A44290  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
TBR22_A40970  mcm3; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
TBR22_A40980  hypothetical protein [KO:K01847] [EC:5.4.99.2]
TBR22_A34130  methylmalonyl-CoA mutase [KO:K01849] [EC:5.4.99.2]
TBR22_A34140  methylmalonyl-CoA mutase [KO:K01848] [EC:5.4.99.2]
TBR22_A16860  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
TBR22_A28050  glcD-1; FAD-binding protein [KO:K00104] [EC:1.1.99.14]
TBR22_A16850  2-hydroxy-acid oxidase [KO:K11472] [EC:1.1.99.14]
TBR22_A16840  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
TBR22_A01850  katE; catalase HPII [KO:K03781] [EC:1.11.1.6]
TBR22_A18450  srpA; catalase-related peroxidase [KO:K03781] [EC:1.11.1.6]
TBR22_A06870  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
TBR22_A08060  gph; phosphoglycolate phosphatase, bacterial [KO:K01091] [EC:3.1.3.18]
TBR22_A22990  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
TBR22_A35130  haloacid dehalogenase [KO:K01091] [EC:3.1.3.18]
TBR22_A16880  alanine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
TBR22_A44980  putative ferredoxin-dependent glutamate synthase [KO:K00284] [EC:1.4.7.1]
TBR22_A52350  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
TBR22_A26610  glnN; glutamine synthetase [KO:K01915] [EC:6.3.1.2]
TBR22_A48380  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
TBR22_A25430  gcvP; glycine dehydrogenase (decarboxylating) [KO:K00281] [EC:1.4.4.2]
TBR22_A25410  aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
TBR22_A50360  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
TBR22_A36210  lpd; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
TBR22_A25420  gcvH; glycine cleavage system H protein [KO:K02437]
TBR22_A19930  hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
TBR22_A44070  hypothetical protein [KO:K01816] [EC:5.3.1.22]
TBR22_A31540  hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
TBR22_A19900  2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
TBR22_A21730  cyclase [KO:K07130] [EC:3.5.1.9]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
lub00010  Glycolysis / Gluconeogenesis
lub00020  Citrate cycle (TCA cycle)
lub00030  Pentose phosphate pathway
lub00053  Ascorbate and aldarate metabolism
lub00071  Fatty acid degradation
lub00230  Purine metabolism
lub00250  Alanine, aspartate and glutamate metabolism
lub00260  Glycine, serine and threonine metabolism
lub00620  Pyruvate metabolism
lub00710  Carbon fixation by Calvin cycle
lub00750  Vitamin B6 metabolism
lub00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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