KEGG   PATHWAY: lyt00240
Entry
lyt00240                    Pathway                                
Name
Pyrimidine metabolism - Lysobacter sp. TY2-98
Class
Metabolism; Nucleotide metabolism
Pathway map
lyt00240  Pyrimidine metabolism
lyt00240

Module
lyt_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:lyt00240]
lyt_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:lyt00240]
lyt_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:lyt00240]
Other DBs
GO: 0006220 0006213
Organism
Lysobacter sp. TY2-98 [GN:lyt]
Gene
DWG18_05635  carbamoyl-phosphate synthase large subunit [KO:K01955] [EC:6.3.5.5]
DWG18_03140  aspartate carbamoyltransferase catalytic subunit [KO:K00609] [EC:2.1.3.2]
DWG18_11595  dihydroorotase [KO:K01465] [EC:3.5.2.3]
DWG18_08290  quinone-dependent dihydroorotate dehydrogenase [KO:K00254] [EC:1.3.5.2]
DWG18_12500  orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
DWG18_00645  pyrF; orotidine-5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
DWG18_04280  UMP kinase [KO:K09903] [EC:2.7.4.22]
DWG18_05040  nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
DWG18_01515  nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
DWG18_04140  septum formation inhibitor Maf [KO:K06287] [EC:3.6.1.-]
DWG18_09195  CTP synthase [KO:K01937] [EC:6.3.4.2]
DWG18_04985  (d)CMP kinase [KO:K00945] [EC:2.7.4.25]
DWG18_05865  5'-nucleotidase [KO:K01081] [EC:3.1.3.5]
DWG18_09145  5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
DWG18_07255  uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
DWG18_03680  LOG family protein YgdH [KO:K06966] [EC:3.2.2.10 3.2.2.-]
DWG18_06365  dCTP deaminase [KO:K01494] [EC:3.5.4.13]
DWG18_00945  ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
DWG18_11705  adenosylcobalamin-dependent ribonucleoside-diphosphate reductase [KO:K00525] [EC:1.17.4.1]
DWG18_00950  ribonucleoside-diphosphate reductase [KO:K00526] [EC:1.17.4.1]
DWG18_08465  dTMP kinase [KO:K00943] [EC:2.7.4.9]
DWG18_12520  dUTP diphosphatase [KO:K01520] [EC:3.6.1.23]
DWG18_13085  thymidine kinase [KO:K00857] [EC:2.7.1.21]
DWG18_01600  thymidylate synthase [KO:K00560] [EC:2.1.1.45]
DWG18_10490  malonic semialdehyde reductase [KO:K09019] [EC:1.1.1.-]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
lyt00030  Pentose phosphate pathway
lyt00220  Arginine biosynthesis
lyt00250  Alanine, aspartate and glutamate metabolism
lyt00280  Valine, leucine and isoleucine degradation
lyt00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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