KEGG   PATHWAY: mbs00630
Entry
mbs00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Marinobacter sp. BSs20148
Class
Metabolism; Carbohydrate metabolism
Pathway map
mbs00630  Glyoxylate and dicarboxylate metabolism
mbs00630

Other DBs
GO: 0046487 0043648
Organism
Marinobacter sp. BSs20148 [GN:mbs]
Gene
MRBBS_3504  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
MRBBS_2594  acsA; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
MRBBS_2633  acsA; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
MRBBS_2443  glcB; Malate synthase G [KO:K01638] [EC:2.3.3.9]
MRBBS_1703  gltA; Citrate synthase [KO:K01647] [EC:2.3.3.1]
MRBBS_1923  aconitate hydratase [KO:K01681] [EC:4.2.1.3]
MRBBS_3639  acnA; Aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
MRBBS_2454  acnB; Aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
MRBBS_3167  fadA; 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
MRBBS_2574  Acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MRBBS_3216  phbA; Acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MRBBS_2677  Acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
MRBBS_2449  phbB; Acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
MRBBS_2448  MaoC-like dehydratase [KO:K17865] [EC:4.2.1.55]
MRBBS_0332  glcD; Glycolate oxidase subunit glcD [KO:K00104] [EC:1.1.99.14]
MRBBS_0331  glcE; Glycolate oxidase subunit glcE [KO:K11472] [EC:1.1.99.14]
MRBBS_0330  glcF; Glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
MRBBS_3162  hprA; Glycerate dehydrogenase [KO:K00018] [EC:1.1.1.29]
MRBBS_2469  ppaX; Pyrophosphatase ppaX [KO:K01091] [EC:3.1.3.18]
MRBBS_3536  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
MRBBS_0358  sgaA; Serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
MRBBS_0374  sgaA; Serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
MRBBS_0399  puuA; Gamma-glutamylputrescine synthetase PuuA [KO:K01915] [EC:6.3.1.2]
MRBBS_0644  glnA; Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
MRBBS_3244  glnT; Glutamine synthetase 3 [KO:K01915] [EC:6.3.1.2]
MRBBS_0706  glyA; Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
MRBBS_1710  lpdG; Dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
MRBBS_3515  lpdA; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
MRBBS_0676  gcvH; Glycine cleavage system H protein [KO:K02437]
MRBBS_2915  glxK; Glycerate kinase [KO:K00865] [EC:2.7.1.165]
MRBBS_2629  leuB; 3-isopropylmalate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
MRBBS_2424  eda; 2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
MRBBS_3436  fdhA; Formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
MRBBS_0133  yjgC; putative oxidoreductase yjgC [KO:K00123] [EC:1.17.1.9]
MRBBS_3437  fdhB1; Formate dehydrogenase iron-sulfur subunit [KO:K00124]
MRBBS_0132  nuoF2; NADH-quinone oxidoreductase subunit F 2 [KO:K00124]
MRBBS_3438  fdnI; Formate dehydrogenase, nitrate-inducible, cytochrome b556(fdn) subunit [KO:K00127]
MRBBS_0131  nuoE; NADH-quinone oxidoreductase subunit E [KO:K00127]
MRBBS_0443  purU; Formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
MRBBS_1518  purU; Formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
MRBBS_1191  fmdA; Formamidase [KO:K01455] [EC:3.5.1.49]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
mbs00010  Glycolysis / Gluconeogenesis
mbs00020  Citrate cycle (TCA cycle)
mbs00030  Pentose phosphate pathway
mbs00053  Ascorbate and aldarate metabolism
mbs00071  Fatty acid degradation
mbs00230  Purine metabolism
mbs00250  Alanine, aspartate and glutamate metabolism
mbs00260  Glycine, serine and threonine metabolism
mbs00620  Pyruvate metabolism
mbs00710  Carbon fixation by Calvin cycle
mbs00750  Vitamin B6 metabolism
mbs00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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