KEGG   PATHWAY: melm00630
Entry
melm00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Pulveribacter suum
Class
Metabolism; Carbohydrate metabolism
Pathway map
melm00630  Glyoxylate and dicarboxylate metabolism
melm00630

Module
melm_M00012  Glyoxylate cycle [PATH:melm00630]
melm_M00621  Glycine cleavage system [PATH:melm00630]
Other DBs
GO: 0046487 0043648
Organism
Pulveribacter suum [GN:melm]
Gene
C7H73_10995  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
C7H73_12360  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
C7H73_01400  malate synthase G [KO:K01638] [EC:2.3.3.9]
C7H73_07145  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
C7H73_07110  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
C7H73_12155  acnA; aconitate hydratase [KO:K01681] [EC:4.2.1.3]
C7H73_07160  acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase [KO:K01682] [EC:4.2.1.3 4.2.1.99]
C7H73_10905  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
C7H73_03870  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
C7H73_08045  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
C7H73_09370  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
C7H73_12755  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
C7H73_09375  beta-ketoacyl-ACP reductase [KO:K00023] [EC:1.1.1.36]
C7H73_09465  accC; acetyl-CoA carboxylase biotin carboxylase subunit [KO:K01965] [EC:6.4.1.3]
C7H73_09460  methylmalonyl-CoA carboxyltransferase [KO:K01966] [EC:6.4.1.3 2.1.3.15]
C7H73_09450  methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
C7H73_00355  FAD-binding oxidoreductase [KO:K00104] [EC:1.1.99.14]
C7H73_02330  glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
C7H73_02340  glycolate oxidase iron-sulfur subunit [KO:K11473] [EC:1.1.99.14]
C7H73_09255  catalase HPII [KO:K03781] [EC:1.11.1.6]
C7H73_03995  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
C7H73_07545  D-glycerate dehydrogenase [KO:K00090] [EC:1.1.1.79 1.1.1.81 1.1.1.215]
C7H73_01550  gph; phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
C7H73_12775  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
C7H73_06710  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
C7H73_11685  glyA; serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
C7H73_08075  gcvP; glycine dehydrogenase (aminomethyl-transferring) [KO:K00281] [EC:1.4.4.2]
C7H73_08085  gcvT; glycine cleavage system protein T [KO:K00605] [EC:2.1.2.10]
C7H73_15165  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
C7H73_10155  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
C7H73_10300  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
C7H73_08455  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
C7H73_08080  gcvH; glycine cleavage system protein H [KO:K02437]
C7H73_12275  glycerate kinase [KO:K11529] [EC:2.7.1.165]
C7H73_06950  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
C7H73_07375  keto-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
C7H73_05000  fdnG; formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
C7H73_04995  fdxH; formate dehydrogenase subunit beta [KO:K00124]
C7H73_04990  formate dehydrogenase subunit gamma [KO:K00127]
C7H73_06355  kynB; arylformamidase [KO:K07130] [EC:3.5.1.9]
C7H73_00345  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
C7H73_08000  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
melm00010  Glycolysis / Gluconeogenesis
melm00020  Citrate cycle (TCA cycle)
melm00030  Pentose phosphate pathway
melm00053  Ascorbate and aldarate metabolism
melm00071  Fatty acid degradation
melm00230  Purine metabolism
melm00250  Alanine, aspartate and glutamate metabolism
melm00260  Glycine, serine and threonine metabolism
melm00620  Pyruvate metabolism
melm00710  Carbon fixation by Calvin cycle
melm00750  Vitamin B6 metabolism
melm00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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