KEGG   PATHWAY: mfy00630
Entry
mfy00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Massilia forsythiae
Class
Metabolism; Carbohydrate metabolism
Pathway map
mfy00630  Glyoxylate and dicarboxylate metabolism
mfy00630

Module
mfy_M00012  Glyoxylate cycle [PATH:mfy00630]
mfy_M00621  Glycine cleavage system [PATH:mfy00630]
Other DBs
GO: 0046487 0043648
Organism
Massilia forsythiae [GN:mfy]
Gene
HH212_16805  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
HH212_17690  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
HH212_02160  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
HH212_23030  malate synthase A [KO:K01638] [EC:2.3.3.9]
HH212_15220  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
HH212_26800  malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
HH212_15255  gltA; citrate (Si)-synthase [KO:K01647] [EC:2.3.3.1]
HH212_15205  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
HH212_07730  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HH212_08665  acetyl-CoA C-acyltransferase [KO:K00626] [EC:2.3.1.9]
HH212_25890  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
HH212_07725  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
HH212_04015  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
HH212_04010  glcE; glycolate oxidase subunit GlcE [KO:K11472] [EC:1.1.99.14]
HH212_04005  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
HH212_18250  catalase [KO:K03781] [EC:1.11.1.6]
HH212_21275  catalase [KO:K03781] [EC:1.11.1.6]
HH212_04450  catalase family peroxidase [KO:K03781] [EC:1.11.1.6]
HH212_05000  catalase [KO:K03781] [EC:1.11.1.6]
HH212_05390  catalase [KO:K03781] [EC:1.11.1.6]
HH212_09150  catalase [KO:K03781] [EC:1.11.1.6]
HH212_08525  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
HH212_24130  D-2-hydroxyacid dehydrogenase [KO:K00018] [EC:1.1.1.29]
HH212_13355  HAD-IIIA family hydrolase [KO:K01091] [EC:3.1.3.18]
HH212_04860  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
HH212_09430  HAD hydrolase-like protein [KO:K01091] [EC:3.1.3.18]
HH212_22510  aminotransferase class V-fold PLP-dependent enzyme [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
HH212_02755  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
HH212_10570  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
HH212_10595  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
HH212_00355  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
HH212_18215  gcvP; aminomethyl-transferring glycine dehydrogenase [KO:K00281] [EC:1.4.4.2]
HH212_18225  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
HH212_12890  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HH212_15370  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HH212_21105  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HH212_08915  dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HH212_18220  gcvH; glycine cleavage system protein GcvH [KO:K02437]
HH212_25875  hydroxypyruvate isomerase family protein [KO:K01816] [EC:5.3.1.22]
HH212_09750  NAD(P)-dependent oxidoreductase [KO:K00042] [EC:1.1.1.60]
HH212_23535  glycerate kinase [KO:K00865] [EC:2.7.1.165]
HH212_23625  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
HH212_04670  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
HH212_14085  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
HH212_08450  formate dehydrogenase subunit delta [KO:K00126] [EC:1.17.1.9]
HH212_08455  fdhF; formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
HH212_21860  fdnG; formate dehydrogenase-N subunit alpha [KO:K00123] [EC:1.17.1.9]
HH212_21865  fdxH; formate dehydrogenase subunit beta [KO:K00124]
HH212_08460  formate dehydrogenase [KO:K00124]
HH212_21870  formate dehydrogenase subunit gamma [KO:K00127]
HH212_08465  formate dehydrogenase [KO:K00127]
HH212_25800  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
HH212_11115  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
mfy00010  Glycolysis / Gluconeogenesis
mfy00020  Citrate cycle (TCA cycle)
mfy00030  Pentose phosphate pathway
mfy00053  Ascorbate and aldarate metabolism
mfy00071  Fatty acid degradation
mfy00230  Purine metabolism
mfy00250  Alanine, aspartate and glutamate metabolism
mfy00260  Glycine, serine and threonine metabolism
mfy00620  Pyruvate metabolism
mfy00710  Carbon fixation by Calvin cycle
mfy00750  Vitamin B6 metabolism
mfy00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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