KEGG   PATHWAY: micc00630
Entry
micc00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Microbulbifer aggregans
Class
Metabolism; Carbohydrate metabolism
Pathway map
micc00630  Glyoxylate and dicarboxylate metabolism
micc00630

Module
micc_M00012  Glyoxylate cycle [PATH:micc00630]
micc_M00621  Glycine cleavage system [PATH:micc00630]
Other DBs
GO: 0046487 0043648
Organism
Microbulbifer aggregans [GN:micc]
Gene
AUP74_02598  Isocitrate lyase [KO:K01637] [EC:4.1.3.1]
AUP74_01735  acs; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
AUP74_02551  acsA_3; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
AUP74_01215  acsA_1; Acetyl-coenzyme A synthetase [KO:K01895] [EC:6.2.1.1]
AUP74_02595  glcB; Malate synthase G [KO:K01638] [EC:2.3.3.9]
AUP74_02622  mdh; Malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
AUP74_03339  gltA; Citrate synthase [KO:K01647] [EC:2.3.3.1]
AUP74_00374  hacA; Homoaconitase large subunit [KO:K01681] [EC:4.2.1.3]
AUP74_02323  acnB; Aconitate hydratase 2 [KO:K01682] [EC:4.2.1.3 4.2.1.99]
AUP74_02416  fadA_3; 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
AUP74_03310  fadI; 3-ketoacyl-CoA thiolase [KO:K00626] [EC:2.3.1.9]
AUP74_03386  thlA; Acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
AUP74_00505  fadA_1; Putative acyltransferase [KO:K00626] [EC:2.3.1.9]
AUP74_02809  putative FAD-linked oxidoreductase [KO:K00104] [EC:1.1.99.14]
AUP74_02808  glycolate oxidase FAD binding subunit [KO:K11472] [EC:1.1.99.14]
AUP74_02807  glpC; Anaerobic glycerol-3-phosphate dehydrogenase subunit C [KO:K11473] [EC:1.1.99.14]
AUP74_01954  katA; Catalase [KO:K03781] [EC:1.11.1.6]
AUP74_01573  Putative 2-hydroxyacid dehydrogenase [KO:K00018] [EC:1.1.1.29]
AUP74_02638  ppaX; Pyrophosphatase PpaX [KO:K01091] [EC:3.1.3.18]
AUP74_01683  puuA_1; Gamma-glutamylputrescine synthetase PuuA [KO:K01915] [EC:6.3.1.2]
AUP74_00726  glnA; Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
AUP74_03289  puuA_4; Gamma-glutamylputrescine synthetase PuuA [KO:K01915] [EC:6.3.1.2]
AUP74_02615  puuA_2; Gamma-glutamylputrescine synthetase PuuA [KO:K01915] [EC:6.3.1.2]
AUP74_03010  puuA_3; Gamma-glutamylputrescine synthetase PuuA [KO:K01915] [EC:6.3.1.2]
AUP74_00317  glyA2; Serine hydroxymethyltransferase 2 [KO:K00600] [EC:2.1.2.1]
AUP74_01816  gcvP; Glycine dehydrogenase (decarboxylating) [KO:K00281] [EC:1.4.4.2]
AUP74_00484  gcvT; Aminomethyltransferase [KO:K00605] [EC:2.1.2.10]
AUP74_03332  lpdG; Dihydrolipoamide dehydrogenase [KO:K00382] [EC:1.8.1.4]
AUP74_00483  gcvH; Glycine cleavage system H protein [KO:K02437]
AUP74_01518  nucleoside triphosphate hydrolase domain-containing protein [KO:K15918] [EC:2.7.1.31]
AUP74_00052  eda; KHG/KDPG aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
AUP74_01809  purU; Formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
micc00010  Glycolysis / Gluconeogenesis
micc00020  Citrate cycle (TCA cycle)
micc00030  Pentose phosphate pathway
micc00053  Ascorbate and aldarate metabolism
micc00071  Fatty acid degradation
micc00230  Purine metabolism
micc00250  Alanine, aspartate and glutamate metabolism
micc00260  Glycine, serine and threonine metabolism
micc00620  Pyruvate metabolism
micc00710  Carbon fixation by Calvin cycle
micc00750  Vitamin B6 metabolism
micc00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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