KEGG   PATHWAY: mjd00240
Entry
mjd00240                    Pathway                                
Name
Pyrimidine metabolism - Mycolicibacter sinensis
Class
Metabolism; Nucleotide metabolism
Pathway map
mjd00240  Pyrimidine metabolism
mjd00240

Module
mjd_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:mjd00240]
mjd_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:mjd00240]
mjd_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:mjd00240]
Other DBs
GO: 0006220 0006213
Organism
Mycolicibacter sinensis [GN:mjd]
Gene
JDM601_2311  carB; carbamoyl-phosphate synthase large chain CarB [KO:K01955] [EC:6.3.5.5]
JDM601_2312  carA; carbamoyl-phosphate synthase small chain CarA [KO:K01956] [EC:6.3.5.5]
JDM601_2315  pyrB; aspartate carbamoyltransferase PyrB [KO:K00609] [EC:2.1.3.2]
JDM601_2314  pyrC; dihydroorotase PyrC [KO:K01465] [EC:3.5.2.3]
JDM601_1756  pyrD; dihydroorotate dehydrogenase PyrD [KO:K00254] [EC:1.3.5.2]
JDM601_0351  pyrE; orotate phosphoribosyltransferase PyrE [KO:K00762] [EC:2.4.2.10]
JDM601_2310  pyrF; orotidine 5'-phosphate decarboxylase PyrF [KO:K01591] [EC:4.1.1.23]
JDM601_2600  pyrH; uridylate kinase PyrH [KO:K09903] [EC:2.7.4.22]
JDM601_1462  ndk; nucleoside diphosphate kinase NdkA [KO:K00940] [EC:2.7.4.6]
JDM601_0984  nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
JDM601_3041  nucleotide-binding protein [KO:K06287] [EC:3.6.1.-]
JDM601_1855  pyrG; CTP synthase PyrG [KO:K01937] [EC:6.3.4.2]
JDM601_1864  cmk; cytidylate kinase Cmk [KO:K00945] [EC:2.7.4.25]
JDM601_3134  upp; uracil phosphoribosyltransferase Upp [KO:K00761] [EC:2.4.2.9]
JDM601_2316  pyrR; pyrimidine operon regulatory protein PyrR [KO:K02825] [EC:2.4.2.9]
JDM601_1169  conserved hypothetical protein [KO:K16329] [EC:4.2.1.70]
JDM601_3142  cdd; cytidine deaminase Cdd [KO:K01489] [EC:3.5.4.5]
JDM601_0322  dcd; deoxycytidine triphosphate deaminase Dcd [KO:K01494] [EC:3.5.4.13]
JDM601_2787  nrdE; ribonucleoside-diphosphate reductase (alpha chain) NrdE [KO:K00525] [EC:1.17.4.1]
JDM601_2780  nrdF; ribonucleoside-diphosphate reductase (beta chain) NrdF2 [KO:K00526] [EC:1.17.4.1]
JDM601_0215  ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
JDM601_2987  tmk; thymidylate kinase Tmk [KO:K00943] [EC:2.7.4.9]
JDM601_2439  dut; deoxyuridine 5'-triphosphate nucleotidohydrolase DutT [KO:K01520] [EC:3.6.1.23]
JDM601_3141  deoA; thymidine phosphorylase DeoA [KO:K00758] [EC:2.4.2.4]
JDM601_2510  thyA; thymidylate synthase ThyA [KO:K00560] [EC:2.1.1.45]
JDM601_2504  thyX; thymidylate synthase ThyX [KO:K03465] [EC:2.1.1.148]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
mjd00030  Pentose phosphate pathway
mjd00220  Arginine biosynthesis
mjd00250  Alanine, aspartate and glutamate metabolism
mjd00280  Valine, leucine and isoleucine degradation
mjd00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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