KEGG   PATHWAY: mnt00630
Entry
mnt00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Morus notabilis
Class
Metabolism; Carbohydrate metabolism
Pathway map
mnt00630  Glyoxylate and dicarboxylate metabolism
mnt00630

Module
mnt_M00012  Glyoxylate cycle [PATH:mnt00630]
mnt_M00532  Photorespiration [PATH:mnt00630]
mnt_M00621  Glycine cleavage system [PATH:mnt00630]
Other DBs
GO: 0046487 0043648
Organism
Morus notabilis [GN:mnt]
Gene
21401234  isocitrate lyase [KO:K01637] [EC:4.1.3.1]
21390971  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal [KO:K01895] [EC:6.2.1.1]
21391130  acetate/butyrate--CoA ligase AAE7, peroxisomal [KO:K01913] [EC:6.2.1.1 6.2.1.2]
21388561  malate synthase, glyoxysomal [KO:K01638] [EC:2.3.3.9]
21404290  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
21404632  malate dehydrogenase isoform X2 [KO:K00025] [EC:1.1.1.37]
21384723  malate dehydrogenase, glyoxysomal isoform X1 [KO:K00026] [EC:1.1.1.37]
21399030  malate dehydrogenase, chloroplastic [KO:K00026] [EC:1.1.1.37]
21399159  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
21401654  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
21399865  citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
21403798  citrate synthase, glyoxysomal [KO:K01647] [EC:2.3.3.1]
21409265  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
21385574  LOW QUALITY PROTEIN: aconitate hydratase, cytoplasmic [KO:K01681] [EC:4.2.1.3]
21393913  acetyl-CoA acetyltransferase, cytosolic 1 [KO:K00626] [EC:2.3.1.9]
21384790  acetyl-CoA acetyltransferase, cytosolic 1 [KO:K00626] [EC:2.3.1.9]
21388356  acetyl-CoA acetyltransferase, cytosolic 1 [KO:K00626] [EC:2.3.1.9]
112093953  peroxisomal (S)-2-hydroxy-acid oxidase GLO4-like [KO:K11517] [EC:1.1.3.15]
112094952  (S)-2-hydroxy-acid oxidase GLO1-like [KO:K11517] [EC:1.1.3.15]
21404489  (S)-2-hydroxy-acid oxidase GLO1 isoform X1 [KO:K11517] [EC:1.1.3.15]
21391530  peroxisomal (S)-2-hydroxy-acid oxidase GLO3 [KO:K11517] [EC:1.1.3.15]
21407574  catalase isozyme 1 [KO:K03781] [EC:1.11.1.6]
21411624  catalase [KO:K03781] [EC:1.11.1.6]
21384495  catalase isozyme 1 [KO:K03781] [EC:1.11.1.6]
21408875  hydroxyphenylpyruvate reductase isoform X1 [KO:K15919] [EC:1.1.1.79 1.1.1.81]
112093632  glyoxylate/hydroxypyruvate reductase HPR3 isoform X1 [KO:K15919] [EC:1.1.1.79 1.1.1.81]
112095181  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
21405926  LOW QUALITY PROTEIN: glyoxylate/hydroxypyruvate reductase HPR3 [KO:K15919] [EC:1.1.1.79 1.1.1.81]
21409771  glyoxylate/succinic semialdehyde reductase 1 [KO:K18121] [EC:1.1.1.79 1.1.1.-]
21388594  glyoxylate/succinic semialdehyde reductase 2, chloroplastic isoform X1 [KO:K18121] [EC:1.1.1.79 1.1.1.-]
21391746  glycerate dehydrogenase [KO:K15893] [EC:1.1.1.29]
21400922  phosphoglycolate phosphatase 2 [KO:K19269] [EC:3.1.3.18 3.1.3.48]
21403531  phosphoglycolate phosphatase 1B, chloroplastic [KO:K19269] [EC:3.1.3.18 3.1.3.48]
24286634  rbcl; ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit [KO:K01601] [EC:4.1.1.39]
21384458  LOW QUALITY PROTEIN: uncharacterized protein LOC21384458 [KO:K01601] [EC:4.1.1.39]
21397779  ribulose bisphosphate carboxylase small chain, chloroplastic [KO:K01602] [EC:4.1.1.39]
21399802  ribulose bisphosphate carboxylase small chain clone 512 [KO:K01602] [EC:4.1.1.39]
21385682  serine--glyoxylate aminotransferase [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
21410308  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
21402329  ferredoxin-dependent glutamate synthase, chloroplastic [KO:K00284] [EC:1.4.7.1]
21394577  glutamine synthetase leaf isozyme, chloroplastic [KO:K01915] [EC:6.3.1.2]
21384720  glutamine synthetase nodule isozyme [KO:K01915] [EC:6.3.1.2]
21388443  glutamine synthetase nodule isozyme [KO:K01915] [EC:6.3.1.2]
21408242  serine hydroxymethyltransferase 2, mitochondrial [KO:K00600] [EC:2.1.2.1]
21409479  serine hydroxymethyltransferase 4 [KO:K00600] [EC:2.1.2.1]
112093220  serine hydroxymethyltransferase 1, mitochondrial [KO:K00600] [EC:2.1.2.1]
21399759  serine hydroxymethyltransferase 7 [KO:K00600] [EC:2.1.2.1]
21387631  serine hydroxymethyltransferase 3, chloroplastic [KO:K00600] [EC:2.1.2.1]
21390787  serine hydroxymethyltransferase 7 [KO:K00600] [EC:2.1.2.1]
21402445  glycine dehydrogenase (decarboxylating), mitochondrial [KO:K00281] [EC:1.4.4.2]
21397339  aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
21408817  leghemoglobin reductase [KO:K00382] [EC:1.8.1.4]
21391122  dihydrolipoyl dehydrogenase 2, chloroplastic [KO:K00382] [EC:1.8.1.4]
21406072  glycine cleavage system H protein, mitochondrial [KO:K02437]
21392956  glycine cleavage system H protein 2, mitochondrial [KO:K02437]
21402400  D-glycerate 3-kinase, chloroplastic [KO:K15918] [EC:2.7.1.31]
21391796  formate dehydrogenase, mitochondrial [KO:K00122] [EC:1.17.1.9]
21406837  formyltetrahydrofolate deformylase 1, mitochondrial isoform X1 [KO:K01433] [EC:3.5.1.10]
21389362  uncharacterized protein LOC21389362 isoform X2 [KO:K01455] [EC:3.5.1.49]
112094512  LOW QUALITY PROTEIN: oxalate--CoA ligase [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
mnt00010  Glycolysis / Gluconeogenesis
mnt00020  Citrate cycle (TCA cycle)
mnt00030  Pentose phosphate pathway
mnt00053  Ascorbate and aldarate metabolism
mnt00071  Fatty acid degradation
mnt00230  Purine metabolism
mnt00250  Alanine, aspartate and glutamate metabolism
mnt00260  Glycine, serine and threonine metabolism
mnt00620  Pyruvate metabolism
mnt00710  Carbon fixation by Calvin cycle
mnt00750  Vitamin B6 metabolism
mnt00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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