KEGG   PATHWAY: mof00630
Entry
mof00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Malania oleifera
Class
Metabolism; Carbohydrate metabolism
Pathway map
mof00630  Glyoxylate and dicarboxylate metabolism
mof00630

Module
mof_M00012  Glyoxylate cycle [PATH:mof00630]
mof_M00532  Photorespiration [PATH:mof00630]
mof_M00621  Glycine cleavage system [PATH:mof00630]
Other DBs
GO: 0046487 0043648
Organism
Malania oleifera [GN:mof]
Gene
131150769  isocitrate lyase isoform X1 [KO:K01637] [EC:4.1.3.1]
131167891  acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal isoform X1 [KO:K01895] [EC:6.2.1.1]
131151066  acetate--CoA ligase CCL3 [KO:K01913] [EC:6.2.1.1 6.2.1.2]
131159453  malate synthase, glyoxysomal [KO:K01638] [EC:2.3.3.9]
131150688  malate dehydrogenase [KO:K00025] [EC:1.1.1.37]
131156426  malate dehydrogenase, cytoplasmic-like isoform X1 [KO:K00025] [EC:1.1.1.37]
131165108  malate dehydrogenase, glyoxysomal [KO:K00026] [EC:1.1.1.37]
131145125  malate dehydrogenase, mitochondrial-like [KO:K00026] [EC:1.1.1.37]
131146692  malate dehydrogenase, mitochondrial [KO:K00026] [EC:1.1.1.37]
131160610  malate dehydrogenase, chloroplastic isoform X1 [KO:K00026] [EC:1.1.1.37]
131148889  citrate synthase, glyoxysomal [KO:K01647] [EC:2.3.3.1]
131159442  citrate synthase, mitochondrial [KO:K01647] [EC:2.3.3.1]
131164985  aconitate hydratase, cytoplasmic isoform X1 [KO:K01681] [EC:4.2.1.3]
131147796  aconitate hydratase 1 [KO:K01681] [EC:4.2.1.3]
131147806  aconitate hydratase, cytoplasmic [KO:K01681] [EC:4.2.1.3]
131153153  acetyl-CoA acetyltransferase 2-like isoform X1 [KO:K00626] [EC:2.3.1.9]
131148836  acetyl-CoA acetyltransferase 2 [KO:K00626] [EC:2.3.1.9]
131163631  peroxisomal (S)-2-hydroxyacid oxidase GLO4 [KO:K11517] [EC:1.1.3.15]
131145203  glycolate oxidase 1 isoform X1 [KO:K11517] [EC:1.1.3.15]
131162204  catalase isozyme 1 isoform X1 [KO:K03781] [EC:1.11.1.6]
131162205  catalase isozyme 2-like [KO:K03781] [EC:1.11.1.6]
131164083  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
131164861  glyoxylate/hydroxypyruvate reductase HPR3-like [KO:K15919] [EC:1.1.1.79 1.1.1.81]
131164936  glyoxylate/succinic semialdehyde reductase 2, chloroplastic isoform X1 [KO:K18121] [EC:1.1.1.79 1.1.1.-]
131147814  glyoxylate/succinic semialdehyde reductase 1 [KO:K18121] [EC:1.1.1.79 1.1.1.-]
131156638  glycerate dehydrogenase [KO:K15893] [EC:1.1.1.29]
131153454  phosphoglycolate phosphatase 1A, chloroplastic-like isoform X1 [KO:K19269] [EC:3.1.3.18 3.1.3.48]
131153989  phosphoglycolate phosphatase 2 isoform X1 [KO:K19269] [EC:3.1.3.18 3.1.3.48]
131152765  ribulose bisphosphate carboxylase large chain [KO:K01601] [EC:4.1.1.39]
131144042  ribulose bisphosphate carboxylase large chain-like [KO:K01601] [EC:4.1.1.39]
131165791  ribulose bisphosphate carboxylase small subunit, chloroplastic 3-like [KO:K01602] [EC:4.1.1.39]
131143448  ribulose bisphosphate carboxylase small subunit, chloroplastic-like isoform X1 [KO:K01602] [EC:4.1.1.39]
131148959  serine--glyoxylate aminotransferase isoform X1 [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
131144087  glutamate--glyoxylate aminotransferase 2 [KO:K14272] [EC:2.6.1.4 2.6.1.2 2.6.1.44]
131168155  ferredoxin-dependent glutamate synthase, chloroplastic-like [KO:K00284] [EC:1.4.7.1]
131154365  glutamine synthetase nodule isozyme-like [KO:K01915] [EC:6.3.1.2]
131159354  glutamine synthetase cytosolic isozyme 2 [KO:K01915] [EC:6.3.1.2]
131161634  serine hydroxymethyltransferase, mitochondrial-like isoform X1 [KO:K00600] [EC:2.1.2.1]
131151895  serine hydroxymethyltransferase 4 [KO:K00600] [EC:2.1.2.1]
131164002  serine hydroxymethyltransferase 7-like [KO:K00600] [EC:2.1.2.1]
131154030  serine hydroxymethyltransferase, mitochondrial [KO:K00600] [EC:2.1.2.1]
131165584  serine hydroxymethyltransferase 3, chloroplastic isoform X1 [KO:K00600] [EC:2.1.2.1]
131158254  glycine dehydrogenase (decarboxylating), mitochondrial-like [KO:K00281] [EC:1.4.4.2]
131150182  glycine dehydrogenase (decarboxylating), mitochondrial isoform X1 [KO:K00281] [EC:1.4.4.2]
131152883  aminomethyltransferase, mitochondrial [KO:K00605] [EC:2.1.2.10]
131151366  dihydrolipoyl dehydrogenase 2, chloroplastic-like isoform X1 [KO:K00382] [EC:1.8.1.4]
131151702  dihydrolipoyl dehydrogenase 1, mitochondrial [KO:K00382] [EC:1.8.1.4]
131163903  glycine cleavage system H protein 3, mitochondrial isoform X1 [KO:K02437]
131160613  glycine cleavage system H protein 2, mitochondrial [KO:K02437]
131158901  D-glycerate 3-kinase, chloroplastic isoform X1 [KO:K15918] [EC:2.7.1.31]
131168005  formate dehydrogenase, mitochondrial isoform X1 [KO:K00122] [EC:1.17.1.9]
131163335  formyltetrahydrofolate deformylase 2, mitochondrial isoform X1 [KO:K01433] [EC:3.5.1.10]
131152439  uncharacterized protein LOC131152439 [KO:K01455] [EC:3.5.1.49]
131152443  uncharacterized protein LOC131152443 isoform X1 [KO:K01455] [EC:3.5.1.49]
131146620  probable CoA ligase CCL9 [KO:K22133] [EC:6.2.1.8]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
mof00010  Glycolysis / Gluconeogenesis
mof00020  Citrate cycle (TCA cycle)
mof00030  Pentose phosphate pathway
mof00053  Ascorbate and aldarate metabolism
mof00071  Fatty acid degradation
mof00230  Purine metabolism
mof00250  Alanine, aspartate and glutamate metabolism
mof00260  Glycine, serine and threonine metabolism
mof00620  Pyruvate metabolism
mof00710  Carbon fixation by Calvin cycle
mof00750  Vitamin B6 metabolism
mof00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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