KEGG   PATHWAY: mrf01100
Entry
mrf01100                    Pathway                                
Name
Metabolic pathways - Mycolicibacterium rufum
Class
Pathway map
mrf01100  Metabolic pathways
mrf01100

Module
mrf_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:mrf01100]
mrf_M00002  Glycolysis, core module involving three-carbon compounds [PATH:mrf01100]
mrf_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:mrf01100]
mrf_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:mrf01100]
mrf_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:mrf01100]
mrf_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:mrf01100]
mrf_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:mrf01100]
mrf_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:mrf01100]
mrf_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:mrf01100]
mrf_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:mrf01100]
mrf_M00012  Glyoxylate cycle [PATH:mrf01100]
mrf_M00015  Proline biosynthesis, glutamate => proline [PATH:mrf01100]
mrf_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:mrf01100]
mrf_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:mrf01100]
mrf_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:mrf01100]
mrf_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:mrf01100]
mrf_M00026  Histidine biosynthesis, PRPP => histidine [PATH:mrf01100]
mrf_M00027  GABA (gamma-Aminobutyrate) shunt [PATH:mrf01100]
mrf_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:mrf01100]
mrf_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:mrf01100]
mrf_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:mrf01100]
mrf_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:mrf01100]
mrf_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:mrf01100]
mrf_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:mrf01100]
mrf_M00082  Fatty acid biosynthesis, initiation [PATH:mrf01100]
mrf_M00083  Fatty acid biosynthesis, elongation [PATH:mrf01100]
mrf_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:mrf01100]
mrf_M00087  beta-Oxidation [PATH:mrf01100]
mrf_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:mrf01100]
mrf_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:mrf01100]
mrf_M00098  Acylglycerol degradation [PATH:mrf01100]
mrf_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:mrf01100]
mrf_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:mrf01100]
mrf_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:mrf01100]
mrf_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:mrf01100]
mrf_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:mrf01100]
mrf_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:mrf01100]
mrf_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:mrf01100]
mrf_M00149  Succinate dehydrogenase, prokaryotes [PATH:mrf01100]
mrf_M00151  Cytochrome bc1 complex respiratory unit [PATH:mrf01100]
mrf_M00155  Cytochrome c oxidase, prokaryotes [PATH:mrf01100]
mrf_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:mrf01100]
mrf_M00168  CAM (Crassulacean acid metabolism), dark [PATH:mrf01100]
mrf_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:mrf01100]
mrf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:mrf01100]
mrf_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:mrf01100]
mrf_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:mrf01100]
mrf_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:mrf01100]
mrf_M00545  Trans-cinnamate degradation, trans-cinnamate => acetyl-CoA [PATH:mrf01100]
mrf_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:mrf01100]
mrf_M00555  Betaine biosynthesis, choline => betaine [PATH:mrf01100]
mrf_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:mrf01100]
mrf_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:mrf01100]
mrf_M00621  Glycine cleavage system [PATH:mrf01100]
mrf_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:mrf01100]
mrf_M00793  dTDP-L-rhamnose biosynthesis [PATH:mrf01100]
mrf_M00844  Arginine biosynthesis, ornithine => arginine [PATH:mrf01100]
mrf_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:mrf01100]
mrf_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:mrf01100]
mrf_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:mrf01100]
mrf_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:mrf01100]
mrf_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:mrf01100]
mrf_M00926  Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:mrf01100]
mrf_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:mrf01100]
mrf_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:mrf01100]
mrf_M00970  Proline degradation, proline => glutamate [PATH:mrf01100]
mrf_M00972  Proline metabolism [PATH:mrf01100]
Organism
Mycolicibacterium rufum [GN:mrf]
Related
pathway
mrf00010  Glycolysis / Gluconeogenesis
mrf00020  Citrate cycle (TCA cycle)
mrf00030  Pentose phosphate pathway
mrf00040  Pentose and glucuronate interconversions
mrf00051  Fructose and mannose metabolism
mrf00052  Galactose metabolism
mrf00053  Ascorbate and aldarate metabolism
mrf00061  Fatty acid biosynthesis
mrf00071  Fatty acid degradation
mrf00100  Steroid biosynthesis
mrf00121  Secondary bile acid biosynthesis
mrf00130  Ubiquinone and other terpenoid-quinone biosynthesis
mrf00190  Oxidative phosphorylation
mrf00220  Arginine biosynthesis
mrf00230  Purine metabolism
mrf00240  Pyrimidine metabolism
mrf00250  Alanine, aspartate and glutamate metabolism
mrf00260  Glycine, serine and threonine metabolism
mrf00261  Monobactam biosynthesis
mrf00270  Cysteine and methionine metabolism
mrf00280  Valine, leucine and isoleucine degradation
mrf00290  Valine, leucine and isoleucine biosynthesis
mrf00300  Lysine biosynthesis
mrf00310  Lysine degradation
mrf00330  Arginine and proline metabolism
mrf00332  Carbapenem biosynthesis
mrf00340  Histidine metabolism
mrf00350  Tyrosine metabolism
mrf00360  Phenylalanine metabolism
mrf00361  Chlorocyclohexane and chlorobenzene degradation
mrf00362  Benzoate degradation
mrf00364  Fluorobenzoate degradation
mrf00380  Tryptophan metabolism
mrf00400  Phenylalanine, tyrosine and tryptophan biosynthesis
mrf00401  Novobiocin biosynthesis
mrf00410  beta-Alanine metabolism
mrf00430  Taurine and hypotaurine metabolism
mrf00450  Selenocompound metabolism
mrf00460  Cyanoamino acid metabolism
mrf00470  D-Amino acid metabolism
mrf00480  Glutathione metabolism
mrf00500  Starch and sucrose metabolism
mrf00514  Other types of O-glycan biosynthesis
mrf00515  Mannose type O-glycan biosynthesis
mrf00520  Amino sugar and nucleotide sugar metabolism
mrf00521  Streptomycin biosynthesis
mrf00523  Polyketide sugar unit biosynthesis
mrf00525  Acarbose and validamycin biosynthesis
mrf00540  Lipopolysaccharide biosynthesis
mrf00541  O-Antigen nucleotide sugar biosynthesis
mrf00542  O-Antigen repeat unit biosynthesis
mrf00543  Exopolysaccharide biosynthesis
mrf00550  Peptidoglycan biosynthesis
mrf00552  Teichoic acid biosynthesis
mrf00561  Glycerolipid metabolism
mrf00562  Inositol phosphate metabolism
mrf00564  Glycerophospholipid metabolism
mrf00592  alpha-Linolenic acid metabolism
mrf00600  Sphingolipid metabolism
mrf00620  Pyruvate metabolism
mrf00621  Dioxin degradation
mrf00622  Xylene degradation
mrf00623  Toluene degradation
mrf00625  Chloroalkane and chloroalkene degradation
mrf00626  Naphthalene degradation
mrf00627  Aminobenzoate degradation
mrf00630  Glyoxylate and dicarboxylate metabolism
mrf00633  Nitrotoluene degradation
mrf00640  Propanoate metabolism
mrf00643  Styrene degradation
mrf00650  Butanoate metabolism
mrf00660  C5-Branched dibasic acid metabolism
mrf00670  One carbon pool by folate
mrf00680  Methane metabolism
mrf00710  Carbon fixation by Calvin cycle
mrf00720  Other carbon fixation pathways
mrf00730  Thiamine metabolism
mrf00740  Riboflavin metabolism
mrf00750  Vitamin B6 metabolism
mrf00760  Nicotinate and nicotinamide metabolism
mrf00770  Pantothenate and CoA biosynthesis
mrf00780  Biotin metabolism
mrf00785  Lipoic acid metabolism
mrf00790  Folate biosynthesis
mrf00860  Porphyrin metabolism
mrf00900  Terpenoid backbone biosynthesis
mrf00903  Limonene degradation
mrf00906  Carotenoid biosynthesis
mrf00907  Pinene, camphor and geraniol degradation
mrf00910  Nitrogen metabolism
mrf00920  Sulfur metabolism
mrf00930  Caprolactam degradation
mrf00946  Degradation of flavonoids
mrf00984  Steroid degradation
mrf00998  Biosynthesis of various antibiotics
mrf00999  Biosynthesis of various plant secondary metabolites
mrf01040  Biosynthesis of unsaturated fatty acids
mrf01059  Biosynthesis of enediyne antibiotics
KO pathway
ko01100   
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