KEGG   PATHWAY: mrf00010
Entry
mrf00010                    Pathway                                
Name
Glycolysis / Gluconeogenesis - Mycolicibacterium rufum
Description
Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
Class
Metabolism; Carbohydrate metabolism
Pathway map
mrf00010  Glycolysis / Gluconeogenesis
mrf00010

Module
mrf_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:mrf00010]
mrf_M00002  Glycolysis, core module involving three-carbon compounds [PATH:mrf00010]
mrf_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:mrf00010]
mrf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:mrf00010]
Other DBs
GO: 0006096 0006094
Organism
Mycolicibacterium rufum [GN:mrf]
Gene
MJO55_05120  ROK family protein [KO:K25026] [EC:2.7.1.2]
MJO55_22260  pgi; glucose-6-phosphate isomerase [KO:K01810] [EC:5.3.1.9]
MJO55_08215  1-phosphofructokinase family hexose kinase [KO:K16370] [EC:2.7.1.11]
MJO55_09520  6-phosphofructokinase [KO:K21071] [EC:2.7.1.11 2.7.1.90]
MJO55_21030  glpX; class II fructose-bisphosphatase [KO:K02446] [EC:3.1.3.11]
MJO55_13145  fructose bisphosphate aldolase [KO:K01623] [EC:4.1.2.13]
MJO55_02385  fbaA; class II fructose-bisphosphate aldolase [KO:K01624] [EC:4.1.2.13]
MJO55_07010  class II fructose-bisphosphate aldolase family protein [KO:K01624] [EC:4.1.2.13]
MJO55_12245  tpiA; triose-phosphate isomerase [KO:K01803] [EC:5.3.1.1]
MJO55_12235  gap; type I glyceraldehyde-3-phosphate dehydrogenase [KO:K00134] [EC:1.2.1.12]
MJO55_12240  phosphoglycerate kinase [KO:K00927] [EC:2.7.2.3]
MJO55_03300  phosphoglyceromutase [KO:K01834] [EC:5.4.2.11]
MJO55_21735  eno; phosphopyruvate hydratase [KO:K01689] [EC:4.2.1.11]
MJO55_12875  pyk; pyruvate kinase [KO:K00873] [EC:2.7.1.40]
MJO55_08150  ppsA; phosphoenolpyruvate synthase [KO:K01007] [EC:2.7.9.2]
MJO55_16880  aceE; pyruvate dehydrogenase (acetyl-transferring), homodimeric type [KO:K00163] [EC:1.2.4.1]
MJO55_05685  pdhA; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha [KO:K00161] [EC:1.2.4.1]
MJO55_05690  alpha-ketoacid dehydrogenase subunit beta [KO:K00162] [EC:1.2.4.1]
MJO55_05695  2-oxo acid dehydrogenase subunit E2 [KO:K00627] [EC:2.3.1.12]
MJO55_16660  sucB; 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase [KO:K00627] [EC:2.3.1.12]
MJO55_03160  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
MJO55_18040  2-oxoacid:acceptor oxidoreductase subunit alpha [KO:K00174] [EC:1.2.7.3 1.2.7.11]
MJO55_18035  2-oxoacid:ferredoxin oxidoreductase subunit beta [KO:K00175] [EC:1.2.7.3 1.2.7.11]
MJO55_01795  L-lactate dehydrogenase [KO:K00016] [EC:1.1.1.27]
MJO55_23535  NDMA-dependent alcohol dehydrogenase [KO:K00121] [EC:1.1.1.284 1.1.1.1]
MJO55_01870  adhE; bifunctional acetaldehyde-CoA/alcohol dehydrogenase [KO:K04072] [EC:1.2.1.10 1.1.1.1]
MJO55_00135  alcohol dehydrogenase catalytic domain-containing protein [KO:K13953] [EC:1.1.1.1]
MJO55_05710  zinc-binding alcohol dehydrogenase family protein [KO:K13953] [EC:1.1.1.1]
MJO55_05870  adhP; alcohol dehydrogenase AdhP [KO:K13953] [EC:1.1.1.1]
MJO55_02380  alcohol dehydrogenase catalytic domain-containing protein [KO:K00001] [EC:1.1.1.1]
MJO55_16240  zinc-binding dehydrogenase [KO:K00001] [EC:1.1.1.1]
MJO55_09340  NAD(P)-dependent alcohol dehydrogenase [KO:K13979] [EC:1.1.1.2]
MJO55_22540  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
MJO55_23500  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
MJO55_00445  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
MJO55_01155  aldehyde dehydrogenase [KO:K00128] [EC:1.2.1.3]
MJO55_04595  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
MJO55_18800  aldehyde dehydrogenase family protein [KO:K00128] [EC:1.2.1.3]
MJO55_05865  aldehyde dehydrogenase family protein [KO:K00138] [EC:1.2.1.-]
MJO55_22760  AMP-binding protein [KO:K01895] [EC:6.2.1.1]
MJO55_24750  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
MJO55_05680  acsA; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
MJO55_02715  acetate--CoA ligase family protein [KO:K24012] [EC:6.2.1.13]
MJO55_02275  aldose 1-epimerase [KO:K01785] [EC:5.1.3.3]
MJO55_08850  pgm; phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) [KO:K01835] [EC:5.4.2.2]
MJO55_11080  ROK family protein [KO:K00886] [EC:2.7.1.63]
MJO55_01040  phosphoenolpyruvate carboxykinase (GTP) [KO:K01596] [EC:4.1.1.32]
MJO55_01995  PTS glucose transporter subunit IIA [KO:K02777] [EC:2.7.1.-]
Compound
C00022  Pyruvate
C00024  Acetyl-CoA
C00031  D-Glucose
C00033  Acetate
C00036  Oxaloacetate
C00068  Thiamin diphosphate
C00074  Phosphoenolpyruvate
C00084  Acetaldehyde
C00085  D-Fructose 6-phosphate
C00103  D-Glucose 1-phosphate
C00111  Glycerone phosphate
C00118  D-Glyceraldehyde 3-phosphate
C00186  (S)-Lactate
C00197  3-Phospho-D-glycerate
C00221  beta-D-Glucose
C00236  3-Phospho-D-glyceroyl phosphate
C00267  alpha-D-Glucose
C00354  D-Fructose 1,6-bisphosphate
C00469  Ethanol
C00631  2-Phospho-D-glycerate
C00668  alpha-D-Glucose 6-phosphate
C01159  2,3-Bisphospho-D-glycerate
C01172  beta-D-Glucose 6-phosphate
C01451  Salicin
C05125  2-(alpha-Hydroxyethyl)thiamine diphosphate
C06186  Arbutin
C06187  Arbutin 6-phosphate
C06188  Salicin 6-phosphate
C15972  Enzyme N6-(lipoyl)lysine
C15973  Enzyme N6-(dihydrolipoyl)lysine
C16255  [Dihydrolipoyllysine-residue acetyltransferase] S-acetyldihydrolipoyllysine
Reference
  Authors
Nishizuka Y (ed).
  Title
[Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1980)
Reference
  Authors
Nishizuka Y, Seyama Y, Ikai A, Ishimura Y, Kawaguchi A (eds).
  Title
[Cellular Functions and Metabolic Maps] (In Japanese)
  Journal
Tokyo Kagaku Dojin (1997)
Reference
  Authors
Michal G.
  Title
Biochemical Pathways
  Journal
Wiley (1999)
Related
pathway
mrf00020  Citrate cycle (TCA cycle)
mrf00030  Pentose phosphate pathway
mrf00500  Starch and sucrose metabolism
mrf00620  Pyruvate metabolism
mrf00640  Propanoate metabolism
mrf00710  Carbon fixation by Calvin cycle
KO pathway
ko00010   
LinkDB

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