KEGG   PATHWAY: mrhi00240
Entry
mrhi00240                   Pathway                                
Name
Pyrimidine metabolism - Marinomonas rhizomae
Class
Metabolism; Nucleotide metabolism
Pathway map
mrhi00240  Pyrimidine metabolism
mrhi00240

Module
mrhi_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:mrhi00240]
mrhi_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:mrhi00240]
mrhi_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:mrhi00240]
Other DBs
GO: 0006220 0006213
Organism
Marinomonas rhizomae [GN:mrhi]
Gene
KDW99_18265  carB; carbamoyl-phosphate synthase large subunit [KO:K01955] [EC:6.3.5.5]
KDW99_18270  carA; glutamine-hydrolyzing carbamoyl-phosphate synthase small subunit [KO:K01956] [EC:6.3.5.5]
KDW99_02540  aspartate carbamoyltransferase catalytic subunit [KO:K00609] [EC:2.1.3.2]
KDW99_02545  dihydroorotase [KO:K01465] [EC:3.5.2.3]
KDW99_10920  pyrC; dihydroorotase [KO:K01465] [EC:3.5.2.3]
KDW99_12535  quinone-dependent dihydroorotate dehydrogenase [KO:K00254] [EC:1.3.5.2]
KDW99_02690  pyrE; orotate phosphoribosyltransferase [KO:K00762] [EC:2.4.2.10]
KDW99_14565  pyrF; orotidine-5'-phosphate decarboxylase [KO:K01591] [EC:4.1.1.23]
KDW99_05465  pyrH; UMP kinase [KO:K09903] [EC:2.7.4.22]
KDW99_05880  ndk; nucleoside-diphosphate kinase [KO:K00940] [EC:2.7.4.6]
KDW99_05360  mazG; nucleoside triphosphate pyrophosphohydrolase [KO:K04765] [EC:3.6.1.9]
KDW99_09140  maf; septum formation inhibitor Maf [KO:K06287] [EC:3.6.1.-]
KDW99_00900  M48 family metallopeptidase [KO:K07043] [EC:3.6.1.-]
KDW99_05585  CTP synthase [KO:K01937] [EC:6.3.4.2]
KDW99_07055  cmk; (d)CMP kinase [KO:K00945] [EC:2.7.4.25]
KDW99_19805  bifunctional UDP-sugar hydrolase/5'-nucleotidase [KO:K11751] [EC:3.1.3.5 3.6.1.45]
KDW99_05615  surE; 5'/3'-nucleotidase SurE [KO:K03787] [EC:3.1.3.5 3.1.3.6]
KDW99_10275  yjjG; pyrimidine 5'-nucleotidase [KO:K08723] [EC:3.1.3.-]
KDW99_12725  pyrimidine/purine nucleoside phosphorylase [KO:K09913] [EC:2.4.2.1 2.4.2.2]
KDW99_15800  upp; uracil phosphoribosyltransferase [KO:K00761] [EC:2.4.2.9]
KDW99_02535  pyrR; bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR [KO:K02825] [EC:2.4.2.9]
KDW99_18580  bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase [KO:K01119] [EC:3.1.4.16 3.1.3.6]
KDW99_18465  pseudouridine-5'-phosphate glycosidase [KO:K16329] [EC:4.2.1.70]
KDW99_03640  LOG family protein [KO:K06966] [EC:3.2.2.10 3.2.2.-]
KDW99_02755  cytidine deaminase [KO:K01489] [EC:3.5.4.5]
KDW99_08170  amidohydrolase family protein [KO:K01485] [EC:3.5.4.1 3.5.4.21]
KDW99_13270  codA; cytosine deaminase [KO:K01485] [EC:3.5.4.1 3.5.4.21]
KDW99_13720  dcd; dCTP deaminase [KO:K01494] [EC:3.5.4.13]
KDW99_13835  nrdA; ribonucleoside-diphosphate reductase subunit alpha [KO:K00525] [EC:1.17.4.1]
KDW99_13840  nrdB; ribonucleotide-diphosphate reductase subunit beta [KO:K00526] [EC:1.17.4.1]
KDW99_10350  dTMP kinase [KO:K00943] [EC:2.7.4.9]
KDW99_02705  dut; dUTP diphosphatase [KO:K01520] [EC:3.6.1.23]
KDW99_06900  thymidine kinase [KO:K00857] [EC:2.7.1.21]
KDW99_03960  thymidylate synthase [KO:K00560] [EC:2.1.1.45]
KDW99_18355  hydA; dihydropyrimidinase [KO:K01464] [EC:3.5.2.2]
KDW99_18345  Zn-dependent hydrolase [KO:K06016] [EC:3.5.1.6 3.5.1.87]
Compound
C00015  UDP
C00039  DNA
C00046  RNA
C00055  CMP
C00063  CTP
C00064  L-Glutamine
C00075  UTP
C00086  Urea
C00099  beta-Alanine
C00105  UMP
C00106  Uracil
C00112  CDP
C00119  5-Phospho-alpha-D-ribose 1-diphosphate
C00169  Carbamoyl phosphate
C00178  Thymine
C00214  Thymidine
C00222  3-Oxopropanoate
C00239  dCMP
C00295  Orotate
C00299  Uridine
C00337  (S)-Dihydroorotate
C00363  dTDP
C00364  dTMP
C00365  dUMP
C00380  Cytosine
C00383  Malonate
C00429  5,6-Dihydrouracil
C00438  N-Carbamoyl-L-aspartate
C00458  dCTP
C00459  dTTP
C00460  dUTP
C00475  Cytidine
C00526  Deoxyuridine
C00672  2-Deoxy-D-ribose 1-phosphate
C00705  dCDP
C00813  Barbiturate
C00881  Deoxycytidine
C00941  3',5'-Cyclic CMP
C01013  3-Hydroxypropanoate
C01103  Orotidine 5'-phosphate
C01168  Pseudouridine 5'-phosphate
C01205  (R)-3-Amino-2-methylpropanoate
C01346  dUDP
C01368  3'-UMP
C01563  Carbamate
C02067  Pseudouridine
C02170  Methylmalonate
C02354  2',3'-Cyclic CMP
C02355  2',3'-Cyclic UMP
C02376  5-Methylcytosine
C02642  3-Ureidopropionate
C03997  5-Hydroxymethyldeoxycytidylate
C05281  5-Methylbarbiturate
C05822  3'-CMP
C06198  P1,P4-Bis(5'-uridyl) tetraphosphate
C11038  2'-Deoxy-5-hydroxymethylcytidine-5'-diphosphate
C11039  2'-Deoxy-5-hydroxymethylcytidine-5'-triphosphate
C15607  3-Oxo-3-ureidopropanoate
C20231  (Z)-3-Ureidoacrylate peracid
C20249  (Z)-3-Peroxyaminoacrylate
C20253  Aminoacrylate
C20254  Ureidoacrylate
C20846  3-Oxo-3-ureidoisobutyrate
C21028  (R)-5,6-Dihydrothymine
C21029  (R)-3-Ureidoisobutyrate
C22509  3',5'-Cyclic UMP
Related
pathway
mrhi00030  Pentose phosphate pathway
mrhi00220  Arginine biosynthesis
mrhi00250  Alanine, aspartate and glutamate metabolism
mrhi00280  Valine, leucine and isoleucine degradation
mrhi00410  beta-Alanine metabolism
KO pathway
ko00240   
LinkDB

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