KEGG   PATHWAY: mri00630
Entry
mri00630                    Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Maioricimonas rarisocia
Class
Metabolism; Carbohydrate metabolism
Pathway map
mri00630  Glyoxylate and dicarboxylate metabolism
mri00630

Module
mri_M00621  Glycine cleavage system [PATH:mri00630]
Other DBs
GO: 0046487 0043648
Organism
Maioricimonas rarisocia [GN:mri]
Gene
Mal4_15720  acsA; Acetyl-coenzyme A ligase [KO:K01895] [EC:6.2.1.1]
Mal4_25770  mdh; Malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
Mal4_25960  pcsA; Citrate synthase, plasmid [KO:K01647] [EC:2.3.3.1]
Mal4_15300  acn; Aconitate hydratase precursor [KO:K01681] [EC:4.2.1.3]
Mal4_22650  putative FAD-linked oxidoreductase [KO:K00104] [EC:1.1.99.14]
Mal4_24190  putative FAD-linked oxidoreductase [KO:K11472] [EC:1.1.99.14]
Mal4_24180  lutA_1; Lactate utilization protein A [KO:K11473] [EC:1.1.99.14]
Mal4_42880  ghrB; Glyoxylate/hydroxypyruvate reductase B [KO:K00015] [EC:1.1.1.26]
Mal4_20350  gph_1; Phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
Mal4_25440  5'-nucleotidase [KO:K01091] [EC:3.1.3.18]
Mal4_55060  gph_5; Phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
Mal4_34400  pucG; Purine catabolism protein PucG [KO:K00830] [EC:2.6.1.44 2.6.1.45 2.6.1.51]
Mal4_32360  glnA_1; Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
Mal4_32940  glnA_2; Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
Mal4_52200  glnA_3; Glutamine synthetase [KO:K01915] [EC:6.3.1.2]
Mal4_09180  glyA; Serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
Mal4_30090  gcvPA; putative glycine dehydrogenase (decarboxylating) subunit 1 [KO:K00282] [EC:1.4.4.2]
Mal4_30080  gcvPB; putative glycine dehydrogenase (decarboxylating) subunit 2 [KO:K00283] [EC:1.4.4.2]
Mal4_42540  gcvT_2; Glycine cleavage system T protein [KO:K00605] [EC:2.1.2.10]
Mal4_26920  lpd3; Dihydrolipoyl dehydrogenase 3 [KO:K00382] [EC:1.8.1.4]
Mal4_41210  lpdA; Dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
Mal4_16190  gcvH_1; Glycine cleavage system H protein [KO:K02437]
Mal4_30100  gcvH_2; Glycine cleavage system H protein [KO:K02437]
Mal4_19220  hyi_2; Hydroxypyruvate isomerase [KO:K01816] [EC:5.3.1.22]
Mal4_17590  ttuD; Putative hydroxypyruvate reductase [KO:K11529] [EC:2.7.1.165]
Mal4_43780  kdgA; KHG/KDPG aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
Mal4_22700  fdhF_1; Formate dehydrogenase H [KO:K00123] [EC:1.17.1.9]
Mal4_00820  nqo1; NADH-quinone oxidoreductase subunit 1 [KO:K22515] [EC:1.17.1.9]
Mal4_12920  dmsB; Anaerobic dimethyl sulfoxide reductase chain B [KO:K00124]
Mal4_04450  Carboxylesterase [KO:K01432] [EC:3.5.1.9]
Mal4_37460  nlhH_6; Carboxylesterase NlhH [KO:K01432] [EC:3.5.1.9]
Mal4_38890  kynB_1; Kynurenine formamidase [KO:K07130] [EC:3.5.1.9]
Mal4_43350  purU; Formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
mri00010  Glycolysis / Gluconeogenesis
mri00020  Citrate cycle (TCA cycle)
mri00030  Pentose phosphate pathway
mri00053  Ascorbate and aldarate metabolism
mri00071  Fatty acid degradation
mri00230  Purine metabolism
mri00250  Alanine, aspartate and glutamate metabolism
mri00260  Glycine, serine and threonine metabolism
mri00620  Pyruvate metabolism
mri00710  Carbon fixation by Calvin cycle
mri00750  Vitamin B6 metabolism
mri00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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