KEGG   PATHWAY: msto00920
Entry
msto00920                   Pathway                                
Name
Sulfur metabolism - Mycobacterium stomatepiae
Description
Sulfur is an essential element for life and the metabolism of organic sulfur compounds plays an important role in the global sulfur cycle. Sulfur occurs in various oxidation states ranging from +6 in sulfate to -2 in sulfide (H2S). Sulfate reduction can occur in both an energy consuming assimilatory pathway and an energy producing dissimilatory pathway. The assimilatory pathway, which is found in a wide range of organisms, produces reduced sulfur compounds for the biosynthesis of S-containing amino acids and does not lead to direct excretion of sulfide. In the dissimilatory pathway, which is restricted to obligatory anaerobic bacterial and archaeal lineages, sulfate (or sulfur) is the terminal electron acceptor of the respiratory chain producing large quantities of inorganic sulfide. Both pathways start from the activation of sulfate by reaction with ATP to form adenylyl sulfate (APS). In the assimilatory pathway [MD:M00176] APS is converted to 3'-phosphoadenylyl sulfate (PAPS) and then reduced to sulfite, and sulfite is further reduced to sulfide by the assimilatory sulfite reductase. In the dissimilatory pathway [MD:M00596] APS is directly reduced to sulfite, and sulfite is further reduced to sulfide by the dissimilatory sulfite reductase. The capacity for oxidation of sulfur is quite widespread among bacteria and archaea, comprising phototrophs and chemolithoautotrophs. The SOX (sulfur-oxidation) system [MD:M00595] is a well-known sulfur oxidation pathway and is found in both photosynthetic and non-photosynthetic sulfur-oxidizing bacteria. Green sulfur bacteria and purple sulfur bacteria carry out anoxygenic photosynthesis with reduced sulfur compounds such as sulfide and elemental sulfur, as well as thiosulfate (in some species with the SOX system), as the electron donor for photoautotrophic growth. In some chemolithoautotrophic sulfur oxidizers (such as Thiobacillus denitrificans), it has been suggested that dissimilatory sulfur reduction enzymes operate in the reverse direction, forming a sulfur oxidation pathway from sulfite to APS and then to sulfate.
Class
Metabolism; Energy metabolism
Pathway map
msto00920  Sulfur metabolism
msto00920

Module
msto_M00021  Cysteine biosynthesis, serine => cysteine [PATH:msto00920]
msto_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:msto00920]
Other DBs
GO: 0006790
Organism
Mycobacterium stomatepiae [GN:msto]
Gene
MSTO_57220  subI_2; sulfate ABC transporter substrate-binding protein [KO:K23163]
MSTO_09460  subI_1; sulfate ABC transporter substrate-binding protein [KO:K23163]
MSTO_37550  hypothetical protein [KO:K23163]
MSTO_37560  hypothetical protein [KO:K23163]
MSTO_57230  cysT_2; sulfate ABC transporter permease subunit CysT [KO:K02046]
MSTO_09450  cysT_1; sulfate ABC transporter permease subunit CysT [KO:K02046]
MSTO_57240  cysW_2; sulfate ABC transporter permease CysW [KO:K02047]
MSTO_09440  cysW_1; sulfate ABC transporter permease CysW [KO:K02047]
MSTO_57250  cysA; sulfate/thiosulfate import ATP-binding protein CysA [KO:K02045] [EC:7.3.2.3]
MSTO_48320  ABC transporter substrate-binding protein [KO:K15553]
MSTO_38350  ABC transporter substrate-binding protein [KO:K15553]
MSTO_38620  ABC transporter substrate-binding protein [KO:K15553]
MSTO_13310  putative nitrate ABC transporter, periplasmic protein [KO:K15553]
MSTO_48340  ABC transporter permease [KO:K15554]
MSTO_38340  ABC transporter permease [KO:K15554]
MSTO_38610  putative nitrate ABC transporter, permease protein [KO:K15554]
MSTO_13300  putative nitrate ABC transporter, permease protein [KO:K15554]
MSTO_48330  ssuB; aliphatic sulfonates import ATP-binding protein SsuB [KO:K15555] [EC:7.6.2.14]
MSTO_38360  ABC transporter [KO:K15555] [EC:7.6.2.14]
MSTO_13290  putative nitrate ABC transporter, ATP-binding protein [KO:K15555] [EC:7.6.2.14]
MSTO_38600  ABC transporter ATP-binding protein [KO:K15555] [EC:7.6.2.14]
MSTO_31210  alkanesulfonate monooxygenase [KO:K04091] [EC:1.14.14.5 1.14.14.34]
MSTO_38260  hypothetical protein [KO:K04091] [EC:1.14.14.5 1.14.14.34]
MSTO_38270  hypothetical protein [KO:K04091] [EC:1.14.14.5 1.14.14.34]
MSTO_52340  adenylyl-sulfate kinase [KO:K00955] [EC:2.7.7.4 2.7.1.25]
MSTO_53780  cysNC; bifunctional enzyme CysN/CysC [KO:K00955] [EC:2.7.7.4 2.7.1.25]
MSTO_52350  sulfate adenylyltransferase [KO:K00957] [EC:2.7.7.4]
MSTO_53770  cysD; sulfate adenylyltransferase subunit 2 [KO:K00957] [EC:2.7.7.4]
MSTO_61010  hypothetical protein [KO:K01082] [EC:3.1.3.7]
MSTO_00250  hypothetical protein [KO:K01082] [EC:3.1.3.7]
MSTO_02730  cysQ; 3'-phosphoadenosine 5'-phosphate phosphatase [KO:K01082] [EC:3.1.3.7]
MSTO_17030  bifunctional oligoribonuclease and PAP phosphatase NrnA [KO:K06881] [EC:3.1.3.7 3.1.13.3]
MSTO_57280  cysH; putative phosphoadenosine phosphosulfate reductase [KO:K00390] [EC:1.8.4.8 1.8.4.10]
MSTO_45610  putative sulfite reductase [KO:K00380] [EC:1.8.1.2]
MSTO_58160  hypothetical protein [KO:K00380] [EC:1.8.1.2]
MSTO_58170  bifunctional reductase [KO:K00380] [EC:1.8.1.2]
MSTO_57290  sir; sulfite reductase [ferredoxin] [KO:K00392] [EC:1.8.7.1]
MSTO_03070  hypothetical protein [KO:K17218] [EC:1.8.5.4]
MSTO_03080  hypothetical protein [KO:K17218] [EC:1.8.5.4]
MSTO_46500  sulfurtransferase [KO:K01011] [EC:2.8.1.1 2.8.1.2]
MSTO_00480  sseB; putative thiosulfate sulfurtransferase SseB [KO:K01011] [EC:2.8.1.1 2.8.1.2]
MSTO_26120  sseA; putative thiosulfate sulfurtransferase SseA [KO:K01011] [EC:2.8.1.1 2.8.1.2]
MSTO_50450  serine acetyltransferase [KO:K00640] [EC:2.3.1.30]
MSTO_57940  cysE; serine O-acetyltransferase [KO:K00640] [EC:2.3.1.30]
MSTO_43420  cysteine synthase [KO:K01738] [EC:2.5.1.47]
MSTO_57950  cysK; O-acetylserine sulfhydrylase [KO:K01738] [EC:2.5.1.47]
MSTO_26920  metX; homoserine O-acetyltransferase [KO:K00641] [EC:2.3.1.31 2.3.1.46]
MSTO_51170  metB; cystathionine gamma-synthase [KO:K01739] [EC:2.5.1.48]
MSTO_32860  metZ; O-succinylhomoserine sulfhydrylase [KO:K10764] [EC:2.5.1.-]
MSTO_08240  hypothetical protein [KO:K15762]
MSTO_25450  membrane protein [KO:K21310] [EC:2.1.1.334]
Compound
C00033  Acetate
C00042  Succinate
C00053  3'-Phosphoadenylyl sulfate
C00054  Adenosine 3',5'-bisphosphate
C00059  Sulfate
C00065  L-Serine
C00084  Acetaldehyde
C00087  Sulfur
C00094  Sulfite
C00097  L-Cysteine
C00155  L-Homocysteine
C00224  Adenylyl sulfate
C00245  Taurine
C00263  L-Homoserine
C00283  Hydrogen sulfide
C00320  Thiosulfate
C00409  Methanethiol
C00580  Dimethyl sulfide
C00979  O-Acetyl-L-serine
C01118  O-Succinyl-L-homoserine
C01861  Trithionate
C02084  Tetrathionate
C03920  2-(Methylthio)ethanesulfonate
C04022  S,S-Dimethyl-beta-propiothetin
C08276  3-(Methylthio)propanoate
C11142  Dimethyl sulfone
C11143  Dimethyl sulfoxide
C11145  Methanesulfonic acid
C15521  Alkanesulfonate
C17267  S-Sulfanylglutathione
C19692  Polysulfide
C20870  3-(Methylthio)propanoyl-CoA
C20955  3-(Methylthio)acryloyl-CoA
C22834  Protein-trisulfide
Reference
  Authors
Grein F, Ramos AR, Venceslau SS, Pereira IA
  Title
Unifying concepts in anaerobic respiration: Insights from dissimilatory sulfur metabolism.
  Journal
Biochim Biophys Acta 1827:145-60 (2013)
DOI:10.1016/j.bbabio.2012.09.001
Reference
  Authors
Fauque GD, Barton LL
  Title
Hemoproteins in dissimilatory sulfate- and sulfur-reducing prokaryotes.
  Journal
Adv Microb Physiol 60:1-90 (2012)
DOI:10.1016/B978-0-12-398264-3.00001-2
Reference
  Authors
Sakurai H, Ogawa T, Shiga M, Inoue K
  Title
Inorganic sulfur oxidizing system in green sulfur bacteria.
  Journal
Photosynth Res 104:163-76 (2010)
DOI:10.1007/s11120-010-9531-2
Reference
  Authors
Falkenby LG, Szymanska M, Holkenbrink C, Habicht KS, Andersen JS, Miller M, Frigaard NU
  Title
Quantitative proteomics of Chlorobaculum tepidum: insights into the sulfur metabolism of a phototrophic green sulfur bacterium.
  Journal
FEMS Microbiol Lett 323:142-50 (2011)
DOI:10.1111/j.1574-6968.2011.02370.x
Reference
  Authors
Gregersen LH, Bryant DA, Frigaard NU
  Title
Mechanisms and evolution of oxidative sulfur metabolism in green sulfur bacteria.
  Journal
Front Microbiol 2:116 (2011)
DOI:10.3389/fmicb.2011.00116
Reference
  Authors
Beller HR, Chain PS, Letain TE, Chakicherla A, Larimer FW, Richardson PM, Coleman MA, Wood AP, Kelly DP.
  Title
The genome sequence of the obligately chemolithoautotrophic, facultatively anaerobic bacterium Thiobacillus denitrificans.
  Journal
J Bacteriol 188:1473-88 (2006)
DOI:10.1128/JB.188.4.1473-1488.2006
Reference
PMID:9695921
  Authors
Pott AS, Dahl C
  Title
Sirohaem sulfite reductase and other proteins encoded by genes at the dsr locus of Chromatium vinosum are involved in the oxidation of intracellular sulfur.
  Journal
Microbiology 144 ( Pt 7):1881-94 (1998)
DOI:10.1099/00221287-144-7-1881
Reference
  Authors
Frigaard NU, Dahl C
  Title
Sulfur metabolism in phototrophic sulfur bacteria.
  Journal
Adv Microb Physiol 54:103-200 (2009)
DOI:10.1016/S0065-2911(08)00002-7
Related
pathway
msto00260  Glycine, serine and threonine metabolism
msto00270  Cysteine and methionine metabolism
msto00680  Methane metabolism
msto00720  Other carbon fixation pathways
KO pathway
ko00920   
LinkDB

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