KEGG   PATHWAY: mtez00630
Entry
mtez00630                   Pathway                                
Name
Glyoxylate and dicarboxylate metabolism - Microvirga terrae
Class
Metabolism; Carbohydrate metabolism
Pathway map
mtez00630  Glyoxylate and dicarboxylate metabolism
mtez00630

Module
mtez_M00012  Glyoxylate cycle [PATH:mtez00630]
mtez_M00621  Glycine cleavage system [PATH:mtez00630]
mtez_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:mtez00630]
Other DBs
GO: 0046487 0043648
Organism
Microvirga terrae [GN:mtez]
Gene
HPT29_002035  aceA; isocitrate lyase [KO:K01637] [EC:4.1.3.1]
HPT29_001915  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
HPT29_007645  acs; acetate--CoA ligase [KO:K01895] [EC:6.2.1.1]
HPT29_005410  malate synthase G [KO:K01638] [EC:2.3.3.9]
HPT29_002340  mdh; malate dehydrogenase [KO:K00024] [EC:1.1.1.37]
HPT29_018900  citrate synthase [KO:K01647] [EC:2.3.3.1]
HPT29_018905  citrate synthase [KO:K01647] [EC:2.3.3.1]
HPT29_012850  gltA; citrate synthase [KO:K01647] [EC:2.3.3.1]
HPT29_000705  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
HPT29_001335  acnA; aconitate hydratase AcnA [KO:K01681] [EC:4.2.1.3]
HPT29_020995  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HPT29_002495  acetyl-CoA acetyltransferase [KO:K00626] [EC:2.3.1.9]
HPT29_003175  acetyl-CoA C-acetyltransferase [KO:K00626] [EC:2.3.1.9]
HPT29_003170  phbB; acetoacetyl-CoA reductase [KO:K00023] [EC:1.1.1.36]
HPT29_012745  mce; methylmalonyl-CoA epimerase [KO:K05606] [EC:5.1.99.1]
HPT29_009470  acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha [KO:K01965] [EC:6.4.1.3]
HPT29_009435  acyl-CoA carboxylase subunit beta [KO:K01966] [EC:6.4.1.3 2.1.3.15]
HPT29_017535  methylmalonyl-CoA mutase subunit beta [KO:K01847] [EC:5.4.99.2]
HPT29_017545  scpA; methylmalonyl-CoA mutase [KO:K01847] [EC:5.4.99.2]
HPT29_020200  FAD-binding protein [KO:K00104] [EC:1.1.99.14]
HPT29_020195  FAD-binding protein [KO:K11472] [EC:1.1.99.14]
HPT29_020185  glcF; glycolate oxidase subunit GlcF [KO:K11473] [EC:1.1.99.14]
HPT29_024295  catalase [KO:K03781] [EC:1.11.1.6]
HPT29_000755  D-glycerate dehydrogenase [KO:K00015] [EC:1.1.1.26]
HPT29_005585  glyoxylate/hydroxypyruvate reductase A [KO:K12972] [EC:1.1.1.79 1.1.1.81]
HPT29_022745  D-2-hydroxyacid dehydrogenase [KO:K00018] [EC:1.1.1.29]
HPT29_016915  phosphoglycolate phosphatase [KO:K01091] [EC:3.1.3.18]
HPT29_001435  HAD family hydrolase [KO:K01091] [EC:3.1.3.18]
HPT29_009420  HAD-IA family hydrolase [KO:K01091] [EC:3.1.3.18]
HPT29_014525  glnA; type I glutamate--ammonia ligase [KO:K01915] [EC:6.3.1.2]
HPT29_020905  glutamine synthetase [KO:K01915] [EC:6.3.1.2]
HPT29_012570  serine hydroxymethyltransferase [KO:K00600] [EC:2.1.2.1]
HPT29_019275  gcvPA; aminomethyl-transferring glycine dehydrogenase subunit GcvPA [KO:K00282] [EC:1.4.4.2]
HPT29_019270  gcvPB; aminomethyl-transferring glycine dehydrogenase subunit GcvPB [KO:K00283] [EC:1.4.4.2]
HPT29_019290  gcvT; glycine cleavage system aminomethyltransferase GcvT [KO:K00605] [EC:2.1.2.10]
HPT29_002370  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HPT29_004180  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HPT29_012990  lpdA; dihydrolipoyl dehydrogenase [KO:K00382] [EC:1.8.1.4]
HPT29_019285  gcvH; glycine cleavage system protein GcvH [KO:K02437]
HPT29_013520  NAD(P)-dependent oxidoreductase [KO:K00042] [EC:1.1.1.60]
HPT29_006245  glycerate kinase [KO:K11529] [EC:2.7.1.165]
HPT29_021220  aldA; aldehyde dehydrogenase [KO:K07248] [EC:1.2.1.22 1.2.1.21]
HPT29_000230  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
HPT29_000235  tartrate dehydrogenase [KO:K07246] [EC:1.1.1.93 4.1.1.73 1.1.1.83]
HPT29_007165  eda; bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase [KO:K01625] [EC:4.1.2.14 4.1.3.42]
HPT29_026100  formate dehydrogenase subunit alpha [KO:K00123] [EC:1.17.1.9]
HPT29_026095  fdh3B; formate dehydrogenase FDH3 subunit beta [KO:K00124]
HPT29_026090  formate dehydrogenase subunit gamma [KO:K00127]
HPT29_021640  purU; formyltetrahydrofolate deformylase [KO:K01433] [EC:3.5.1.10]
HPT29_016590  hutG; N-formylglutamate deformylase [KO:K01458] [EC:3.5.1.68]
Compound
C00007  Oxygen
C00011  CO2
C00014  Ammonia
C00022  Pyruvate
C00024  Acetyl-CoA
C00025  L-Glutamate
C00026  2-Oxoglutarate
C00027  Hydrogen peroxide
C00033  Acetate
C00036  Oxaloacetate
C00037  Glycine
C00042  Succinate
C00048  Glyoxylate
C00058  Formate
C00064  L-Glutamine
C00065  L-Serine
C00091  Succinyl-CoA
C00100  Propanoyl-CoA
C00111  Glycerone phosphate
C00136  Butanoyl-CoA
C00149  (S)-Malate
C00158  Citrate
C00160  Glycolate
C00168  Hydroxypyruvate
C00197  3-Phospho-D-glycerate
C00209  Oxalate
C00258  D-Glycerate
C00266  Glycolaldehyde
C00311  Isocitrate
C00313  Oxalyl-CoA
C00332  Acetoacetyl-CoA
C00417  cis-Aconitate
C00552  meso-Tartaric acid
C00631  2-Phospho-D-glycerate
C00683  (S)-Methylmalonyl-CoA
C00798  Formyl-CoA
C00877  Crotonoyl-CoA
C00888  Pentanoyl-CoA
C00898  (R,R)-Tartaric acid
C00975  Dihydroxyfumarate
C00988  2-Phosphoglycolate
C01127  4-Hydroxy-2-oxoglutarate
C01146  2-Hydroxy-3-oxopropanoate
C01182  D-Ribulose 1,5-bisphosphate
C01213  (R)-Methylmalonyl-CoA
C01380  Ethylene glycol
C01732  Mesaconate
C01989  3-Ethylmalate
C01990  3-Oxalomalate
C02123  3-Propylmalate
C02405  Formyl phosphate
C03217  2-Hydroxy-3-oxoadipate
C03459  2-Hydroxy-3-oxosuccinate
C03548  trans-2,3-Epoxysuccinate
C03561  (R)-3-Hydroxybutanoyl-CoA
C03618  L-threo-3-Methylaspartate
C04348  L-Malyl-CoA
C06027  L-erythro-3-Methylmalyl-CoA
C06028  2-Methylfumaryl-CoA
C06049  N-Formylderivatives
C18026  (2S)-Ethylmalonyl-CoA
C18324  (2S)-Methylsuccinyl-CoA
C20238  (2R)-Ethylmalonyl-CoA
C22337  D-Ribulose 1-phosphate
Reference
PMID:10978349
  Authors
Njau RK, Herndon CA, Hawes JW.
  Title
Novel beta-hydroxyacid dehydrogenases in Escherichia coli and Haemophilus influenzae.
  Journal
J Biol Chem 275:38780-6 (2000)
DOI:10.1074/jbc.M007432200
Reference
PMID:18065535
  Authors
Zarzycki J, Schlichting A, Strychalsky N, Muller M, Alber BE, Fuchs G
  Title
Mesaconyl-coenzyme A hydratase, a new enzyme of two central carbon metabolic pathways in bacteria.
  Journal
J Bacteriol 190:1366-74 (2008)
DOI:10.1128/JB.01621-07
Reference
PMID:18819910
  Authors
Erb TJ, Retey J, Fuchs G, Alber BE
  Title
Ethylmalonyl-CoA mutase from Rhodobacter sphaeroides defines a new subclade of coenzyme B12-dependent acyl-CoA mutases.
  Journal
J Biol Chem 283:32283-93 (2008)
DOI:10.1074/jbc.M805527200
Reference
PMID:9596633
  Authors
Coschigano KT, Melo-Oliveira R, Lim J, Coruzzi GM
  Title
Arabidopsis gls mutants and distinct Fd-GOGAT genes. Implications for photorespiration and primary nitrogen assimilation.
  Journal
Plant Cell 10:741-52 (1998)
DOI:10.1105/tpc.10.5.741
Reference
PMID:16407450
  Authors
Masclaux-Daubresse C, Reisdorf-Cren M, Pageau K, Lelandais M, Grandjean O, Kronenberger J, Valadier MH, Feraud M, Jouglet T, Suzuki A
  Title
Glutamine synthetase-glutamate synthase pathway and glutamate dehydrogenase play distinct roles in the sink-source nitrogen cycle in tobacco.
  Journal
Plant Physiol 140:444-56 (2006)
DOI:10.1104/pp.105.071910
Reference
PMID:21252347
  Authors
Khomyakova M, Bukmez O, Thomas LK, Erb TJ, Berg IA
  Title
A methylaspartate cycle in haloarchaea.
  Journal
Science 331:334-7 (2011)
DOI:10.1126/science.1196544
Reference
PMID:11513957
  Authors
Serrano JA, Bonete MJ
  Title
Sequencing, phylogenetic and transcriptional analysis of the glyoxylate bypass operon (ace) in the halophilic archaeon Haloferax volcanii.
  Journal
Biochim Biophys Acta 1520:154-62 (2001)
DOI:10.1016/S0167-4781(01)00263-9
Related
pathway
mtez00010  Glycolysis / Gluconeogenesis
mtez00020  Citrate cycle (TCA cycle)
mtez00030  Pentose phosphate pathway
mtez00053  Ascorbate and aldarate metabolism
mtez00071  Fatty acid degradation
mtez00230  Purine metabolism
mtez00250  Alanine, aspartate and glutamate metabolism
mtez00260  Glycine, serine and threonine metabolism
mtez00620  Pyruvate metabolism
mtez00710  Carbon fixation by Calvin cycle
mtez00750  Vitamin B6 metabolism
mtez00910  Nitrogen metabolism
KO pathway
ko00630   
LinkDB

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