KEGG   PATHWAY: nall03440
Entry
nall03440                   Pathway                                
Name
Homologous recombination - Candidatus Nitrospira allomarina
Description
Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.
Class
Genetic Information Processing; Replication and repair
Pathway map
nall03440  Homologous recombination
nall03440

Other DBs
GO: 0000724
Organism
Candidatus Nitrospira allomarina [GN:nall]
Gene
PP769_06735  single-stranded DNA-binding protein [KO:K03111]
PP769_14935  recO; DNA repair protein RecO [KO:K03584]
PP769_04865  recR; recombination mediator RecR [KO:K06187]
PP769_13480  recA; recombinase RecA [KO:K03553]
PP769_03415  polA; DNA polymerase I [KO:K02335] [EC:2.7.7.7]
PP769_02695  ruvA; Holliday junction branch migration protein RuvA [KO:K03550]
PP769_05030  ruvB; Holliday junction branch migration DNA helicase RuvB [KO:K03551] [EC:5.6.2.4]
PP769_07865  DEAD/DEAH box helicase [KO:K03655] [EC:5.6.2.4]
PP769_13960  DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
PP769_19155  DNA polymerase III subunit alpha [KO:K02337] [EC:2.7.7.7]
PP769_04380  dnaN; DNA polymerase III subunit beta [KO:K02338] [EC:2.7.7.7]
PP769_04875  dnaX; DNA polymerase III subunit gamma/tau [KO:K02343] [EC:2.7.7.7]
PP769_06035  holA; DNA polymerase III subunit delta [KO:K02340] [EC:2.7.7.7]
PP769_09120  holB; DNA polymerase III subunit delta' [KO:K02341] [EC:2.7.7.7]
PP769_05685  priA; primosomal protein N' [KO:K04066] [EC:5.6.2.4]
Reference
  Authors
Maloisel L, Fabre F, Gangloff S.
  Title
DNA polymerase delta is preferentially recruited during homologous recombination to promote heteroduplex DNA extension.
  Journal
Mol Cell Biol 28:1373-82 (2008)
DOI:10.1128/MCB.01651-07
Reference
  Authors
Haruta-Takahashi N, Iwasaki H.
  Title
[Recombination mediators]
  Journal
Seikagaku 79:449-53 (2007)
Reference
  Authors
Ouyang KJ, Woo LL, Ellis NA.
  Title
Homologous recombination and maintenance of genome integrity: Cancer and aging through the prism of human RecQ helicases.
  Journal
Mech Ageing Dev 129:425-40 (2008)
DOI:10.1016/j.mad.2008.03.003
Reference
  Authors
Kawabata M, Kawabata T, Nishibori M.
  Title
Role of recA/RAD51 family proteins in mammals.
  Journal
Acta Med Okayama 59:1-9 (2005)
DOI:10.18926/AMO/31987
Reference
  Authors
Prado F, Cortes-Ledesma F, Huertas P, Aguilera A.
  Title
Mitotic recombination in Saccharomyces cerevisiae.
  Journal
Curr Genet 42:185-98 (2003)
DOI:10.1007/s00294-002-0346-3
Reference
  Authors
Heyer WD, Li X, Rolfsmeier M, Zhang XP.
  Title
Rad54: the Swiss Army knife of homologous recombination?
  Journal
Nucleic Acids Res 34:4115-25 (2006)
DOI:10.1093/nar/gkl481
Reference
  Authors
Michel B, Boubakri H, Baharoglu Z, LeMasson M, Lestini R.
  Title
Recombination proteins and rescue of arrested replication forks.
  Journal
DNA Repair (Amst) 6:967-80 (2007)
DOI:10.1016/j.dnarep.2007.02.016
KO pathway
ko03440   
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